Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1210 ATGTTGTTGAGGGTGTTGCATATTGGCAAGTCTGAGACACGTGGTCACGATTTCATCCTCAATGCAAAGTTTGCTGAAATTGATGCTGCAAACTATGACGGGCTGCTGTTACCGGGTGGAAGAGTGCCAGAGTATCTTGCTCATGATCCTCTTGTTGTGGCACTGGTGATCAAGTTTTTCAGTTCTGGAAAAGCACTTGCTTCCATTTGCCACAGACAGTTGATTCTAGCAGCTGCAGGTGTAGCTAAAGGTCGCAAGTGCACCGCTTTTCCTCCTGTTAAACCGGCATTGGTTGCCTCCGGTGCTCATTGGGTTGAACTAGACACCATGGCAGCAATAGTGGTGGATGGTAATCTCATTGCTGCCGCCACTTATGAAGGGAACCCTAAATTTATTCAGCACTTTGTGAAGGCACTTGGAGGCAACGTAAAAGGACTCAAACATAGAGTTTTTGAGGTCTCACTTGCTGATCTTCAAGGGGATCAGGACCACACCTTCAAGAAGATTAGATTGAGAGCAGAAGATGTACAAGGAAGGATGTCTCATGTGGATGTGAATACCACTGATAATTACACTTTGAGGATGTTCTGTATTGGGTTTGCTAAGAGACATTTTAACCAGATGAAAAGAACCTGCTATGCTCAATCAAGCCAAATTCATCAGCAACAGCTCAAAGAGAAAGCGACAACTTTAAAAGATGAACTTGGAGACATGAAGGCCAAACAGATCTGGCAATCCGAGTCGGGCACAGCAGGAGGAACCGAAGAGGTCGGCACTTTGGTAGAAGACACAGGGGGAGGAACAACATCATCATCATCACCCTCATCGGCTCAGCAGTCTTTTGTTTTTTATTTGTAA 858 0.4522 MLLRVLHIGKSETRGHDFILNAKFAEIDAANYDGLLLPGGRVPEYLAHDPLVVALVIKFFSSGKALASICHRQLILAAAGVAKGRKCTAFPPVKPALVASGAHWVELDTMAAIVVDGNLIAAATYEGNPKFIQHFVKALGGNVKGLKHRVFEVSLADLQGDQDHTFKKIRLRAEDVQGRMSHVDVNTTDNYTLRMFCIGFAKRHFNQMKRTCYAQSSQIHQQQLKEKATTLKDELGDMKAKQIWQSESGTAGGTEEVGTLVEDTGGGTTSSSSPSSAQQSFVFYL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1210 285 MobiDBLite consensus disorder prediction 263 285 - -
Amo12g1210 285 Pfam Ribosomal S3Ae family 142 179 IPR001593 GO:0003735|GO:0005840|GO:0006412
Amo12g1210 285 Pfam DJ-1/PfpI family 12 137 IPR002818 -
Amo12g1210 285 MobiDBLite consensus disorder prediction 245 285 - -
Amo12g1210 285 Gene3D - 5 147 IPR029062 -
Amo12g1210 285 PANTHER DJ-1 PROTEIN 11 87 IPR006286 -
Amo12g1210 285 PANTHER DJ-1 PROTEIN 58 151 IPR006286 -
Amo12g1210 285 SUPERFAMILY Class I glutamine amidotransferase-like 12 141 IPR029062 -
Amo12g1210 285 Coils Coil 221 241 - -
Amo12g1210 285 SMART Ribosomal_S3Ae_2 109 252 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1210 Amo-Chr12 39008003 39012338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1210 144 243 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 51.145 1.55e-34 124