Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1160 ATGAAGATCTTTCTTTCTTTAAGGACATTGTCCTTTCTTTGTTGCCTTCTCTTCACTGCTAGTAACTTAGCATCTGAATCACACGCTTCAGTAACTTCGCAGGAGTTCCAATACTTCTGTGATGAGCATAGTATTACCATAGACATCGAAGGCAACTACACAACCAATAGCACCTACCATACCAACCTCAACACTCTTATGTCAAATATTCTCAACAACAAAGAAATCGATTACGGTTTCTACAATGTCTCATACGGCGAGTACCCAAACAGAGTGTACGCCATTGGACTATGTAGAGGAGACATTAAGCCGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCACGGCGGTTTGTCCGAATCGAAAGGTGGCGATCGGGTGGTACAACGACGAACTATGCATGCTGCGATACTCGAATCGCAGCATATTCCACCTGATGGACAATGGACCGGCTTATTACAAGAAAAGCGACAAAAACGCCACGGATTTGAATGAGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGCAAAGCTTCTTCTGGTGACTCTCGGTTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTGTTCAGTGCACGCCTGATTTGTCTGGAGAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTGTTGTAAGGATAGCATGGGTGGTAGGGTTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTCTATGGGCCAACGGCGTATACGCCACCTTCGCCACCAGCTCCGCAGCCCACCACCACCTCTGTAACTAACCCGTCTTCAGGAGGAAAGAGCCACACTCCAGTACTAGTCATCGCCATAACAGTACCTATAGTGGCTGTGACTATGTTCATGTTTATTTTTATCCGCAGCAGGTATCTAAGAAAGAGAAAGCAAAGGAAAAGCAGTTCAAAGGATGATAACACTGAAGATATGGAAATTGTTGAGTCATTACAATTTAACTTGGAGAGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGCTGTTTACAAGGGTATTCTCACTAATGGACAAGAGATTGCTGTAAAAAGGTTGGCAAGGAGTTCTGGTCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATTTGTACCCAATAAAAGTCTTGATTACTTTATATTTGATCCCACCAAGAGAGCAAATTTGGATTGGGAAAGCTGCCACAGAATCATTGGAGGTATTGCTCGAGGTCTTGTCTACCTTCATGAAGATTCTCGATTGCGTATTATTCATCGTGACCTCAAAGCAGCAAATATTCTTTTAGATGAAAAGATGAATCCTAAGATATCAGATTTTGGTACTGCAAAACTATTTGTTACAAGTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCAATTTTATGGACTATTTTCAATCAAGTCGGATGTGTATAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTGAGAATCCAGAGACTCTCATGAACTTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACATTGTAGATACCACATTAAGAAATGGTTCACAGAATGAAATAATTCGATGCATCCACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTCATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGGTCACACTCGCAGTACCTTCAGAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAAGACCAGCACAAGAATCAGTCAATGAAGCTTCAATTACTGATCCATATCCTCGCTAG 2019 0.4022 MKIFLSLRTLSFLCCLLFTASNLASESHASVTSQEFQYFCDEHSITIDIEGNYTTNSTYHTNLNTLMSNILNNKEIDYGFYNVSYGEYPNRVYAIGLCRGDIKPEQCRTCLNQSRANLTAVCPNRKVAIGWYNDELCMLRYSNRSIFHLMDNGPAYYKKSDKNATDLNEFNTKLNDLLNGLKSKASSGDSRLKYAVGNFSLPNFDDVYGLVQCTPDLSGEDCDNCIAQSIERISKDCCKDSMGGRVVRPSCFMRFETSYQFYGPTAYTPPSPPAPQPTTTSVTNPSSGGKSHTPVLVIAITVPIVAVTMFMFIFIRSRYLRKRKQRKSSSKDDNTEDMEIVESLQFNLESIRDATNDFSDANKLGQGGFGAVYKGILTNGQEIAVKRLARSSGQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRERLLVYEFVPNKSLDYFIFDPTKRANLDWESCHRIIGGIARGLVYLHEDSRLRIIHRDLKAANILLDEKMNPKISDFGTAKLFVTSQTHSNTNRIVGTYGYMAPEYQFYGLFSIKSDVYSFGVLVLEIVSGKKSSGNCQSENPETLMNFAWRNWKDGTISNIVDTTLRNGSQNEIIRCIHIALLCVQANEAHRPTMATVLLMLNNHSVTLAVPSEPAFLLNTGSNTSTKRPAQESVNEASITDPYPR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1160 672 MobiDBLite consensus disorder prediction 266 290 - -
Amo12g1160 672 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Amo12g1160 672 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 650 - -
Amo12g1160 672 SUPERFAMILY Protein kinase-like (PK-like) 335 628 IPR011009 -
Amo12g1160 672 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1160 672 Gene3D Transferase(Phosphotransferase) domain 1 434 637 - -
Amo12g1160 672 Gene3D - 44 145 IPR038408 -
Amo12g1160 672 Gene3D - 154 261 IPR038408 -
Amo12g1160 672 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Amo12g1160 672 Gene3D Phosphorylase Kinase; domain 1 318 433 - -
Amo12g1160 672 MobiDBLite consensus disorder prediction 647 665 - -
Amo12g1160 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Amo12g1160 672 Pfam Salt stress response/antifungal 160 257 IPR002902 -
Amo12g1160 672 Pfam Salt stress response/antifungal 51 143 IPR002902 -
Amo12g1160 672 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 650 - -
Amo12g1160 672 MobiDBLite consensus disorder prediction 647 672 - -
Amo12g1160 672 CDD STKc_IRAK 364 630 - -
Amo12g1160 672 Pfam Protein tyrosine and serine/threonine kinase 362 625 IPR001245 GO:0004672|GO:0006468
Amo12g1160 672 SMART serkin_6 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1160 672 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1160 Amo-Chr12 36193250 36197223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1160 7 672 Receptor kinase-like Gene Family AT4G21410 47.315 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo12g1160 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1160 - - adu:107463438 1102.81