Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1157 ATGCTTTGGGTGGTAAGCAAGAAGATAGCAGATGCTAAACTCGCGAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGTACAGCGTCCTGCAACAGAGAGGGAAACTGCTTACACCCAATTTTTTCCACAAGTTGCTCCATCCAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACTCCAGAACAGTGTGCCCTTCTTGTGGAATCCAGAAGGTATGAGGTCTTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGAAATTCAGTAG 312 0.4199 MLWVVSKKIADAKLAKDFQAVLKEFQKVQRPATERETAYTQFFPQVAPSSYTANEADANSGKTPEQCALLVESRRYEVLFLDNEIAFNEAIIEEREHGIQEIQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1157 103 Gene3D - 5 42 - -
Amo12g1157 103 PANTHER SYNTAXIN OF PLANTS PROTEIN 5 103 - -
Amo12g1157 103 PANTHER SYNTAXIN 5 103 IPR045242 -
Amo12g1157 103 SUPERFAMILY t-snare proteins 7 103 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1157 Amo-Chr12 35675760 35676983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1157 6 103 SNARE and Associated Proteins AT5G46860 71.717 1.45e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1157 - K08488 gmx:547656 143.28