Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1146 ATGGCAACTGCTGGTGTGCAAGAAGCTCGTCCTGCTCCACTAACTTCAACTTCCGAACCACCGCCTCTTTTTGATGGAACTACAAGGTTGTACATCTGTTATTATTGCCCCTATGCACAACGTGCATGGATCACCAGAAATTACAAGGGGCTGCAAGAGAAGATCAAATTGATTCCTATTGACCTTGGAAACAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCTCAAAATAAGGTGCCGTCATTGGAGCACAATGGTAAGGTAATTGGAGAAAGTCTTGATTTGATCAAATATATAGATGCCAACTTTGAAGGGCCATCTCTTGTTCCAACGGATCCTGCAAAGAAAGAGTTTGGTGAGCAATTGGTGTCACAAGTTGATTCAGTCACCACAGATTTGTATGCTGCATTGAAAGGGGATGCTATACGACAAGCAAGTCCTATCTTTGATTCCTTTGAGAATGCTCTTGGAAAATTTGATGATGGGCCATTCTTCCTTGGTCAATTCAGCTGGGTGGATATCGCCTATCTTCCATTCATTGAAAGATTCCACGTGGTCTTTGCTGAGGTTTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAGAGCATTCATTGAGGAGGTGAACAAGATTGATGCATATACACAAACAAGGTTTGACAGAAAGGAACTTGTTGATCTTTACAAGAGACGTTTCTTGCCCCAACAGCAGTGA 717 0.4296 MATAGVQEARPAPLTSTSEPPPLFDGTTRLYICYYCPYAQRAWITRNYKGLQEKIKLIPIDLGNRPAWYKEKVYPQNKVPSLEHNGKVIGESLDLIKYIDANFEGPSLVPTDPAKKEFGEQLVSQVDSVTTDLYAALKGDAIRQASPIFDSFENALGKFDDGPFFLGQFSWVDIAYLPFIERFHVVFAEVFKHDITEGRPKLRAFIEEVNKIDAYTQTRFDRKELVDLYKRRFLPQQQ* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1146 238 Gene3D Glutaredoxin 1 104 - -
Amo12g1146 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Amo12g1146 238 Gene3D - 105 236 - -
Amo12g1146 238 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Amo12g1146 238 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Amo12g1146 238 MobiDBLite consensus disorder prediction 1 21 - -
Amo12g1146 238 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Amo12g1146 238 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Amo12g1146 238 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Amo12g1146 238 SFLD Main (cytGST) 29 210 - -
Amo12g1146 238 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Amo12g1146 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1146 Amo-Chr12 34018900 34023073 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1146 8 234 Glutathione S-transferase Gene Family AT5G02790 66.960 5.42e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1146 K00799 - gmx:100793025 405.216