Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1133 ATGAAGATGAATAAGCCTTTGACAACATTGCCAAAATCTCAAGCAATCATGGACACTCCTTCATATTACCCTCTCTCACTCCTCCTACTCCTCTCCCTTCCGCCTCTTCTCACATTCTTCCTCCTCCGCCGCCGCCACTCCTCCTCCCACCGCCAGCCTCCAGGACCACCAGGATGGCCAATTTTCGGCAACTTATTCCAGCTCGGAGACATGCCACACCGCACCCTCGCAAACCTAAGCCATACCTACGGCCCCGTTGTGCGCCTCCAGCTGGGAGCCATCAACACCGTCGCCATCCTCAGCGCCAAAACCGCCACTGAGTTCTTCAAGTCCCACGACCACAACTTCGCCGACAGGACAATCATTCAAACCATGCGAGTCCACAACTACGACAAGTCCTCTTTAGCCCTTGCCCCTTACGGCCCTTACTGGCGCCTCATGCGCCGCCTCGTCACGGTGGACATGCTCGTCGCGAAACGCATCAACGACACCGCTCCCGTCCGGCGCAGGTGCGTCAACGACATGGTTTCCTGGGTAGCAAAAGAAGCTAAAAAAGTCAAAGCCGGCGAAGGTGTCCACGTGGCAAGATTCGTGTTCTTGATGTCGTTCAATCTGTTCGGGAACCTTATGCTTTCCCAAGACATGTTTGACCCGGAATCGGAAACAGGTTCGGATCTGTTTAAAGCAATCATGGGGCTTTTGGAGTGGACGGGGCACGCGAACGTGGCGGACGTGTTCCCGTGGCTTGTGTGGGTGGACCCGCAGGGGCTGCAGCGGAGGATGAAGAGGGACATGGGAAAGGCCATTGATATTGCTTCCAAGTTCGTGAAGGAGCGGTTGCAGTTGCAGCATAGTGATGATATGGCTAGAAAGGATTTCTTGGATGTGCTGCTTCAATTTCAGGGCGGTGGCGGTGAGGAGGCACGGAATATCTCCGACAAGGACCTCAACGTATTCATTTTGGAAATATTCATGGCTGGATCAGAAACTACAAGCAGCACGATAGAGTGGGCACTCACAGAGCTTCTGTGCAACCGTAATTGCTTAATGAAGGTAAAATCCGAGCTCAATAGAGTGGTTGGAACCGCAAGGGAACTCGAAGAGAGTGACATAGAAAAGCTCCCATACCTTCAAGCTGTGGTGAAAGAAACACTTCGCTTGCACCCTCCCATTCCGTTGCTTGTTCCTCGAAGGGCCATTCAGGACACAAAGTTCATGGGATACTACATACCAAAAGACACGCAGGTCTTCGTGAATGCGTGGGCCATTGGAAGGGACCCAGATGTGTGGAAAGACCCTTTGACCTTCAAGCCTGAAAGGTTTATTTTTTGTGATGGTGGGTCAAAGGTAGATTATAAAGGTCAACACTATGAGTTCATTCCATTTGGTGCTGGGAGGAGGATGTGTGCGGGGGTCCCACTAGCCCACAGGGTCCTCCACTTGGTGTTGGGGTCATTGCTACATCGCTTTGATTGGGAGCTTGATAGCCATGTCACGCCATCAACCATGGATATGAGGGACAAATTGGGAATTACAATGAGGAAGCTTGAGCCCTTGCTTGCAGTGCCGAAGCTTGTTGCTCCATCATGA 1590 0.5214 MKMNKPLTTLPKSQAIMDTPSYYPLSLLLLLSLPPLLTFFLLRRRHSSSHRQPPGPPGWPIFGNLFQLGDMPHRTLANLSHTYGPVVRLQLGAINTVAILSAKTATEFFKSHDHNFADRTIIQTMRVHNYDKSSLALAPYGPYWRLMRRLVTVDMLVAKRINDTAPVRRRCVNDMVSWVAKEAKKVKAGEGVHVARFVFLMSFNLFGNLMLSQDMFDPESETGSDLFKAIMGLLEWTGHANVADVFPWLVWVDPQGLQRRMKRDMGKAIDIASKFVKERLQLQHSDDMARKDFLDVLLQFQGGGGEEARNISDKDLNVFILEIFMAGSETTSSTIEWALTELLCNRNCLMKVKSELNRVVGTARELEESDIEKLPYLQAVVKETLRLHPPIPLLVPRRAIQDTKFMGYYIPKDTQVFVNAWAIGRDPDVWKDPLTFKPERFIFCDGGSKVDYKGQHYEFIPFGAGRRMCAGVPLAHRVLHLVLGSLLHRFDWELDSHVTPSTMDMRDKLGITMRKLEPLLAVPKLVAPS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1133 529 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 Gene3D Cytochrome P450 39 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 Pfam Cytochrome P450 53 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 526 - -
Amo12g1133 529 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 526 - -
Amo12g1133 529 SUPERFAMILY Cytochrome P450 53 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1133 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1133 Amo-Chr12 33109199 33123290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1133 51 523 Cytochrome P450 AT3G52970 45.122 1.16e-144 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1133 K22983 - gmx:100785241 769.615