Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1079 ATGGAGAAATCTCGCCACCGCAGGTCCCCCGTTGCTTCCAGGAACCAACCGCACACTCTTGTTCTTCCTCAAGGGAGTAAGCAAGTTCATAGGCAGCGACAATTTCCCGATTTGTCTCCTGATTCTGTTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCCTTCTCGTTCAAATTTGGGTGGAGATCTTCAAAACAACTGTTCGGAACTCCAATTAAGAAGTTACTAGCTGATGAGATGTCGCAAGAAACTGAGTCTAAAAGAAGAAATCCAGGTGTTATTGCCCGTTTGATGGGTCTGGATGGCCTTCCTGCTAACAAGCAGCAAAAGGGTTCATCAGAAAATCCTGTAGAGAAAGTGCGAAACAGAGGAACATCATATGATGGTCGGTCCTCTAGGAGGAGCTCAAAGGATCAACAAGAATTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAATGGTAGAGAGCAGCAGGTATTCATCACACGTGTCCGCAAAAGACCTGAGGAATGCCAACGAAGAGATGTCATTCATTGAGCAGAAGTTTATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCGAGGGATTTCCATGATACACTTGAGGTGCTTGACTCTAACAAGGAACTTCTTCTGAAGTACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAGTGATCTTCAAGCTGATCCTTTCGAATCACATTTGGGTCACACAGAAGCTATGCAATTACCTGAGATTGAGAAGTATGGAAATGAGTTTGACTGGAGATTAGATACCGACACAGCACTGTTGAGTTATGATAAATCTCATCAAAGGCAACATGATGGATATCCTCGGCAATTCAACAGAAGACATGTGATGCATAGTTCACCGCGATCATCAAAGCTTCAGTCAAAGGGAAAACATGAGCAAGGTGCTTCCCCTACAAAGATAGTTGTCCTAAAGCCTAATCTTGGGAAATCTCAGAGTGCTGCCAGGAATGTTTCATCTCCTTGTTCTCCACATATTTTTCAATCTGAGCATGCAAATGATACTGAATTTTCAGATATCCGATATAGGGACTCCAAAATGTATCCGCAAAAGATTAATTTGCCTGATACTGCCCGGCCGTTGAGGCACAACTCTTTGGAATCTAGAGAAATTGCTAAGGAAATCACTCGTCAAATGAAAAATAGTTTGAACAATGGTGGTTGCGTGATGTTGCCCTCTTCCGGACTTAGAGGATATGCTGGGGATGATAGTTCTTGCAGTGTATCTGGAAATGAATCTACTGAGGAATCAGTTGGAACTCCTGCTACTTGGGGAAACTCTTCTGATCTTAATAATTGTAGCAGGAGGTCATCACATTCTGGTGAATCATCTGTGAGTAGGGAGGCAAAGAAGAGATTATCAGAAAGGTGGAAAATGGCGCACAAGTCTCAAGAGATACAAATTATCAGCAAGAGCAGCACACTTGCTGAAATGCTTGCTATCACTGATAAGGATGTGAAGACCACAAATTTTGATGGAAGGTTTACTGAGGAACGGCACCGTAATAAACCTGCTGGGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGATGGATGTATTGGAAGTTTGCCAAGGTCAAGATCTCTACCTGCTTCTTCTAATGTCTTTGGAAGTCCTAGAACAATCATGCGCAATGAAGTGCTTCGTGATGATCGCTTTAGGATGCCAAAGGAAGCCATTAGACGGGAGAGGAGAAGAGGAAGGAGTCATGATCAGAGGCATGGTGTAAATAGTAGAAGCACAAGATCTGGTCACAAGAAATCTTGGTCTATGCTTTCGTCTGAGTTGGAAGGCAATGAGTTTTCACCAAGCTTTAGTGCCATTGAGAATAAAATGGAAATCAATCTTGAAGAAGGTTCACCTAAACTAGATGTTCCAACCACTGAATCTCTTGCTGTGACCCTCAAAGATACAAGTGTGCTTCCTGATACTATTGTGAGTGTGGCAAATGAAGATGCAGACAGGTCTTGTGAACCTTCTGATAAAGTACTGCCTGAAACATCTCTTGTTTTGATCAAAGGTGACAACAGGGTTGCTGACAAAGATAACTCAATTCAGCAGGAACTATCTGCTGGGTCTTCTGATGGAACTTCAGACTGCTTTCAACCACCTGCACCTGGACTTGAATCATCATGTGGTAAAGATACTGATCAACCCAGTCCAGTCTCAGTCCTGGAACCTTCTTTTACAGATGATCTGTCGTCATCATGTTCCGAGTGTTTTGAAAGTCTCAGTGCTGACCTGCAAGGGCTCCGAATGCAGCTCCAGTTGCTGAAGTTGGAATCTGAAGGATATGCGGAGGGCTCTGTGCTAATTTCAAGCGATGAAGAGTGTGGGGAAGGATCTACTAGATTGTCAGAAGACAATCGATTATGCAGAACTGAAGATAGCTGGGAGTCTTCCTACATTATTGATGTGTTGTCTGAATCTGGCATCGATGGCGCTCAACCTGATCCAAATTTTGAATTTTGGCATTCTCTGGAATCCCCTGTAAGTCTCTCAGTGTTTAATGAACTTGAAAAGAGGTACTGTGATTGGACCACTTGTTCAAGGTCTGAAAGACGGTTGCTTTTTGACCGCATAAATTCCGGAATTGTCAAGATCCACAATCAATCCATGAACTTGCAGCCATGGGTGAGCCGTGCAACAACAAATGTTGGTTCTAAACTGATCGAAAATCGGATCCAAGATGGTCTTTTCAGGTTGCTGGGAAGCCAGGGAAAAGTGAAGGATGATGCTTTGGGGAAGGTGTTGGTTAAGGAACCACAGTGGTTGGACTTAGGAGATGAAATTGATGTAATAGGTAGGGAAATTGAGAGATTGTTGTTAGAAGAACTAGTAGCAGAGATAGCTGGTGCATAG 2922 0.4339 MEKSRHRRSPVASRNQPHTLVLPQGSKQVHRQRQFPDLSPDSVSCGGGVADKDSFSFKFGWRSSKQLFGTPIKKLLADEMSQETESKRRNPGVIARLMGLDGLPANKQQKGSSENPVEKVRNRGTSYDGRSSRRSSKDQQEFKDVFEVSEIPMVESSRYSSHVSAKDLRNANEEMSFIEQKFMDAKRLATYQDLQSSRDFHDTLEVLDSNKELLLKYFKRPDSLFKKHLSDLQADPFESHLGHTEAMQLPEIEKYGNEFDWRLDTDTALLSYDKSHQRQHDGYPRQFNRRHVMHSSPRSSKLQSKGKHEQGASPTKIVVLKPNLGKSQSAARNVSSPCSPHIFQSEHANDTEFSDIRYRDSKMYPQKINLPDTARPLRHNSLESREIAKEITRQMKNSLNNGGCVMLPSSGLRGYAGDDSSCSVSGNESTEESVGTPATWGNSSDLNNCSRRSSHSGESSVSREAKKRLSERWKMAHKSQEIQIISKSSTLAEMLAITDKDVKTTNFDGRFTEERHRNKPAGWVEPLGISSRDGWKDGCIGSLPRSRSLPASSNVFGSPRTIMRNEVLRDDRFRMPKEAIRRERRRGRSHDQRHGVNSRSTRSGHKKSWSMLSSELEGNEFSPSFSAIENKMEINLEEGSPKLDVPTTESLAVTLKDTSVLPDTIVSVANEDADRSCEPSDKVLPETSLVLIKGDNRVADKDNSIQQELSAGSSDGTSDCFQPPAPGLESSCGKDTDQPSPVSVLEPSFTDDLSSSCSECFESLSADLQGLRMQLQLLKLESEGYAEGSVLISSDEECGEGSTRLSEDNRLCRTEDSWESSYIIDVLSESGIDGAQPDPNFEFWHSLESPVSLSVFNELEKRYCDWTTCSRSERRLLFDRINSGIVKIHNQSMNLQPWVSRATTNVGSKLIENRIQDGLFRLLGSQGKVKDDALGKVLVKEPQWLDLGDEIDVIGREIERLLLEELVAEIAGA* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1079 973 MobiDBLite consensus disorder prediction 274 288 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 114 141 - -
Amo12g1079 973 Coils Coil 761 781 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 274 315 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 1 47 - -
Amo12g1079 973 PANTHER AFADIN 25 971 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 574 611 - -
Amo12g1079 973 PANTHER AFADIN 25 971 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 708 743 - -
Amo12g1079 973 Coils Coil 168 188 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 101 141 - -
Amo12g1079 973 Pfam Domain of unknown function (DUF4378) 820 969 IPR025486 -
Amo12g1079 973 MobiDBLite consensus disorder prediction 13 39 - -
Amo12g1079 973 MobiDBLite consensus disorder prediction 416 472 - -
Amo12g1079 973 Pfam Protein of unknown function (DUF3741) 179 223 IPR022212 -
Amo12g1079 973 MobiDBLite consensus disorder prediction 457 472 - -
Amo12g1079 973 Pfam DUF761-associated sequence motif 83 107 IPR032795 -
Amo12g1079 973 MobiDBLite consensus disorder prediction 420 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1079 Amo-Chr12 28984686 28990857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1079 69 973 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 39.107 3.35e-140 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1079 - - ccaj:109788117 1139.02