Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1056 ATGGGTGTGTACGGAATTATGCTCATTGCTGCTTTGAGTACATTGCTGCTTATCATTTACAGCTGTTCTGATCAAGTTCTCAGTACTAGGGAAAGGAGAATGGCGAAGTCCAGAGAAGCAGCAGCTAGATCTGTAAGGAAGACTTCAAATGCACGACAAAGATGGAAAACTGCAAAAGACGTTGCTAAAAAGAGTGCAAGTGGACTACAAGCTCAACTATCACGAACATTTTCGCGTAAGAAGGACGTGGCAGATCCAGAAAAAGTTAAAATATTGGGTCAAGCAACTTCAGAAACTGATATAGAATTGCTTTCACATTCACACCCTATTACTCCAAACATTGCTCCCAGCTCATCAGCTGTGCAAAAAGAAAAGGCTAAAGAATCCATTGATCCAATGCAGATGATGCATGAAATTGAAAATGACGATAACCTTCACTTAGAAACTAAAACTAGAGATAAAAGTGTTCAAGGCAAAGCTTCTAAGGAAAAGCAACCTGAAACTCATAGCCAGATTTTTAAGTATGCATATGCTCAATTGGAGAAGGAGAAGGCACAGCAACAAGAAAACAAGAATCTTACTTTCTCAGGAGTAGTTAACATGGCTACCAAAGGTGAACCAAGGAAACGGCTGTTAATGGAAATTTCTTTCAAAGATCTAACTCTCATTTTGAAGGTGCAAAACAAACTTATATTGAGATGTGTAACGGGGAAAATTAAACCTGGGCGCATTACTGCTGTCATGGGTCCATCAGGGGCCGGTAAGACAACATTTCTTTCAGCAGTAGCTGGAAAAGCATTTGGATGCAAGATGACTGGTTCAGTTCTTATAAATGGAAAGACTGAATCAATCCATTCCTATAAGAAAATTATTGGTTTTGTGCCACAAGATGACATAGTTCATGGAAATCTGACAGTAGAAGAGAATTTATGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGCCGAAAGCAGACAAAGTTCTGGTTGTAGAAAGAGTTATTGAATTCTTGGGCCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAACGAGGGATTTCCGGTGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTTTATTGTTAGATGAACCCACATCTGGTTTGGACAGTGCATCATGTCAGCTACTTCTTAGAGCATTAAGACGGGAAGCTCTTCAAGGAGTGAACATATGCATGGTGGTTCACCAACCAAGCTATGCATTGTTCAATATGTTTGATGAGTTGATACTTCTGGCGAAAGGAGGTCTTACTGTGTATCATGGACCTGTCAAGAAAGTTGAAGAATACTTTCTAGGACTTGGGATCTGTATTCCGGAGCGGATCAATCCTCCTGATTACTTTATCGACATTTTGGAGGGCATAGTAGAACCTGGTGGAAGCTCGGGAGTCAGTTATAAAGACCTGCCAGTTAGATGGATGCTTCATAAGGGATACCCAGTACCTCTTGATATGCAGAAGAATGCAGTGAAATTTGGTAACTTAACTCCAAATCCAGCTAAAGAAACTGATCCCAATGGCTCTGGACATGACGAAAGAAGCTTTGCCGGAGAACTATTGCATGATGTTAGACACGTCGTTGAATTGGAGGGGGAGAAGATACTATTCAACTTTTTGAAATCCCAGGATTTATCTAACCGGAAAACTCCTGGGATATTCAAGCAATACAAGTACTTCCTTATACGGATTGTGAAGCAGCGACTAAGGGAGTCTAAAATCCAAGCTATAGATTATCTAATATTATTACTTGCTGGAGCTTGCTTAGGAGCGCTGAGTAGAGGAAATGATCAGAAGTTTGGTGGAGATGGATACATCTATACAGTGATTTGTGTATCTCTTTTATGTAAAATTTCGGCCTTGAGATCATTTTCTCTGGATAAATTGCACTACTGGAGGGAGAGGGATTCTGGGATGAGCAGCTTGGCTTACTTTCTTTCTAGAGATACAATGGATCATTTTAATACTCTGGTTAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTCACCTATCCAAGATCAACTTTTGCGGATAATTACATTGTGCTGCTCTGTCTAGTATACTGTGTGACTGGAATAGCATATACATTGGCAATAGTATTCAAACCTGGCGCGGCACAGCTATGGTCAGTGCTTCTTCCAGTTGTTTTAACCCTTGTTGCAACACAAGCTAAAGACAGTAAARTTTTGAAGGTTWTAGCAAATTTATGRTACCCTAAGTGGGCTTTAGAAGCATTCGTAATCGCAAATGCTGAAAGGTACCATGGAGTGTGGATCATAAGTCGTTGTGGTTCACTAAAGAGAAGTGACTATAATATTCATGATTGGAGTTTGTGTGTTTCCATCCTAATTCTTATGGGTGTAACCGCTCGGGCAATAGCTTTATTCTCTATGCTTACCTTTCAAAAGAAGTGA 2466 0.4035 MGVYGIMLIAALSTLLLIIYSCSDQVLSTRERRMAKSREAAARSVRKTSNARQRWKTAKDVAKKSASGLQAQLSRTFSRKKDVADPEKVKILGQATSETDIELLSHSHPITPNIAPSSSAVQKEKAKESIDPMQMMHEIENDDNLHLETKTRDKSVQGKASKEKQPETHSQIFKYAYAQLEKEKAQQQENKNLTFSGVVNMATKGEPRKRLLMEISFKDLTLILKVQNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAVAGKAFGCKMTGSVLINGKTESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSADLPKADKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLLLDEPTSGLDSASCQLLLRALRREALQGVNICMVVHQPSYALFNMFDELILLAKGGLTVYHGPVKKVEEYFLGLGICIPERINPPDYFIDILEGIVEPGGSSGVSYKDLPVRWMLHKGYPVPLDMQKNAVKFGNLTPNPAKETDPNGSGHDERSFAGELLHDVRHVVELEGEKILFNFLKSQDLSNRKTPGIFKQYKYFLIRIVKQRLRESKIQAIDYLILLLAGACLGALSRGNDQKFGGDGYIYTVICVSLLCKISALRSFSLDKLHYWRERDSGMSSLAYFLSRDTMDHFNTLVKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYTLAIVFKPGAAQLWSVLLPVVLTLVATQAKDSKXLKVXANLXYPKWALEAFVIANAERYHGVWIISRCGSLKRSDYNIHDWSLCVSILILMGVTARAIALFSMLTFQKK* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1056 821 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 818 - -
Amo12g1056 821 Pfam ABC transporter 234 384 IPR003439 GO:0005524
Amo12g1056 821 CDD ABCG_EPDR 213 439 - -
Amo12g1056 821 ProSitePatterns ABC transporters family signature. 356 370 IPR017871 GO:0005524
Amo12g1056 821 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 215 456 IPR003439 GO:0005524
Amo12g1056 821 MobiDBLite consensus disorder prediction 145 168 - -
Amo12g1056 821 Pfam ABC-2 type transporter 413 821 IPR043926 GO:0140359
Amo12g1056 821 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 2 818 - -
Amo12g1056 821 SMART AAA_5 241 433 IPR003593 -
Amo12g1056 821 Gene3D - 213 448 IPR027417 -
Amo12g1056 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1056 Amo-Chr12 28016605 28023816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1056 231 445 Calmodulin-binding Proteins AT2G36910 28.205 3.65e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1056 - - gmx:100783798 1266.91