Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1045 ATGGAGAGTAGCAGTAATTGGTACGAAAGGTCAAAGCCATTCATAGCTGTTACTTTTCTTCAGTTTGGATTTGCAGGCATGGATGTTCTATCCAAAGCTGCTATGAACAAAGGGATGAGCAACTACGTCCTCGTCGTCTATCGCCACCTCGTTGCCTTCTTCGCCATAGCTCCTTTTGCTCTTTTCCTTGACAAGAAAGTGAGGCCTAAAATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGCATCCTAGAGCCAGTTATTGATCAGAACTTGTATTTTTTGGGGATGAAGTACACAACAGCAACTTTTGCTGCTGCCATGACCAACATGCTTCCTGCCATTACCTTCTTCATGGCTTGCATTCTTAGACTAGAGAAGATTAAAATAAAAAGTATTCGTAGCATAGCAAAGGTGGTTGGAACTCTAGCGACCGTTTCTGGTGCCATGGTGATGACACTGTTGAAAGGGCCAATTATTGAGCTTTTTGGAAGACATGGAGGCAGTAACCACAATCTTCATCACGATGCTGATGAAAATACTCAACATGCAATAAAAGGATTTATTATGATCACAATAGGCTGTTTTAGTTGGGCCTGTTTCGTGATCCTCCAAACTATAACCCTTGAAGCCTACCCTGCTGAGCTCTCTCTTACGGCATGGATATGCATTTTGGGAGCAGCTGAAGGTGCTGCAGTTGCTATGATTATGGAAAGAGCCAACCCTTCTGTTTGGTATCTGAAATGGGATATGAAATTGCTTGCTGTTGTCTACAGTGGCATAGTGTGTTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACAAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATTATGGGCTCCCTCATTCTAGCAGAGAAACTATTTCTTGGCAGGTTGATTGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGCTAAACAAGTTACAGAGGAAGCCAACACCAAAAAGGAACATTGTAATCACCACCACATTGCCATCAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA 1140 0.4246 MESSSNWYERSKPFIAVTFLQFGFAGMDVLSKAAMNKGMSNYVLVVYRHLVAFFAIAPFALFLDKKVRPKMTFSIFMKIVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFFMACILRLEKIKIKSIRSIAKVVGTLATVSGAMVMTLLKGPIIELFGRHGGSNHNLHHDADENTQHAIKGFIMITIGCFSWACFVILQTITLEAYPAELSLTAWICILGAAEGAAVAMIMERANPSVWYLKWDMKLLAVVYSGIVCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEKLFLGRLIGAIVIVLGLYLVVWGKSKDYKPPSNEPVLPAKQVTEEANTKKEHCNHHHIAISNLRAGITTLEEQA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1045 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 143 - -
Amo12g1045 379 Pfam EamA-like transporter family 22 141 IPR000620 GO:0016020|GO:0016021
Amo12g1045 379 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Amo12g1045 379 PANTHER WAT1-RELATED PROTEIN 9 338 - -
Amo12g1045 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 331 - -
Amo12g1045 379 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1045 Amo-Chr12 27314711 27319020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1045 9 367 Nodulin-like Gene Family AT2G37460 61.538 3.11e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1045 - - ahf:112727266 723.391