Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1003 ATGGTTGAAGACTTGAGTAGTAATGAGGGAGGCCAGCCATGTTGGAGGCAAATGGATCTGTATGAAGACTCTCCAGCCAGTTCTGAATACAGTACAGGATCAACTATCCTCCCTCTCTCAGCTGGTGACATTATGGAACACTCTTCACACCGGGATATAGAAACTGAAATGAAAACCACACAAATTGAAGATAAGAAAGAAGTAGATGGATGTGAGAGCGGTGTTCTAGTTACTGCAACCCTGGATCAAGTAGATATGCTGCTGAATTTAGAAGAACAAATAAACAATGATAGCGCTGTTTCTGTCTCATCAAGAGTGGAGTTTGGTTCCCCTGTTCAAGTAACTCCGATATTCAGATCTTTGGCTGCAGGGATTCCCAGCCCACAATTTTCGAAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAGTGGAGTCTCCATCTCTCAACCCAAGTGCTCAACCATCACAACCGCCACCCTGTAAAAGAGCCCTACTATATAGTTTATAA 510 0.4294 MVEDLSSNEGGQPCWRQMDLYEDSPASSEYSTGSTILPLSAGDIMEHSSHRDIETEMKTTQIEDKKEVDGCESGVLVTATLDQVDMLLNLEEQINNDSAVSVSSRVEFGSPVQVTPIFRSLAAGIPSPQFSKSERNFLRKTLGVESPSLNPSAQPSQPPPCKRALLYSL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1003 169 MobiDBLite consensus disorder prediction 1 32 - -
Amo12g1003 169 PANTHER MYB PROTEIN-RELATED 1 167 - -
Amo12g1003 169 PANTHER BNAC02G34810D PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1003 Amo-Chr12 24686222 24687487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1003 1 169 MYB Transcription Factor Family AT1G14350 49.412 3.16e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1003 K09422 - adu:107489199 234.572