Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0962 ATGTTGAAAGCAGAAGAAAATTCCAATCACAAGCAACCAAATGTAGTTGCCAAATTAATGGGGCTTGATGAAGCACTTTCAAGGGGAGAGGCTAATTTATTTTTGGAGAGAAATCATGAAAAGTGTTATTCTCAACACATTTATGGCCATTTAAGGTCACCATTAAAGCATTGGCAAGTTGAAGATAGTGTTAAGGATAAGGAAATGGTCCATGATGTTCTTCATTCAAGAACAGAACAGAATGCTCACAATCAAGATAAAATGGCTCTCATTCATCAGAAATTCATGGAAGCGAAACTTATGTCGAGAAAGTCTAAGAAATTTGAAGATGGATTCAAAGTTCTGAGCTCCAATAATGATGCCTTGATTAGGCTATTGGATTCTCAGAATCTTTATGATCTTCGTCGCTCTGCTTCGCCAGCCGAGACAGAGCTCATTACTCTGCTGAGGCCTGCAAAGACTCTTGACAACAACAACAGATCATCCAGAATGGAAAAGAAGAAAAAGAATGAAGGAATGGAAAAGAATCTCGAACACAATGTTCCGGTTCAATCTACTCGAATCGTTGTATTGAAGCCGAGTTCTGGGAAGACTAATGATCTTAAGGCAATGTACTCTCCAAAAACTTCATTACCTGAAGATGATTTCTTCGAATCAAGAAAAGCGAAAAGAGAGCTTACTTGTCAAAGGGGTGAAACTTTGTTTGAGTGTTCATCTAACAAATCCTATTATAATTACAAAGATAGGAGGAGTTTCAGTGATTTAGATGCTACTATGTCACAACTTCCAAGACATTCATGGGATCATAGTCTTTATTCGACGCGGTCCTTGGACCGCGTCACGTGTTCTCCGGAGTCACCAGTCTGCATAGAAGCCAAGTCAAGACTGTATGAGAGATGGATCATGATGATGACTTCCTCAAACACCAAATTTCATCACCAAGAACAGATCCATGTGAAGAGAAGATCCACCTTGGGCGAACTGCTTTCTCTTTCACAAAGAAAGAAGCATGTTACACCTAAGGTTAAGGATATTATCATTGAAGATCAAGAACCAAGAAAATCAAGAAATGAAGAATTAATGGTTAACAGTGCTCCTAAGAGCCGGCGAATTCGCCTCCGAGATGAAGTTTGTGATCATGATGCTGGCAAAGGGCATGGATCAAAGGGTATGAGATTATCATTCAAAGGAAGAGTTTCAAGTTTCTTGTTCTTAAGGAAGAAGAAATCAACTAAGGAGAAATCCAAAGATAAATCCCAATGTAGTTCTCTATATGAATCAGATTCAGTCTCTAACAGAAAACAGCAAGGCATAATTACATTAGAGCATGAATTGATTGTATCAAAGCCAGAGATTTCAAGCGAAAATCAAGATCAGCCAAGTCCAAGTTCAATTTTAGAGCCTCTATTTCAGGATGACATTCATCATGATTTCTATGACTCTATGAAGAGTGGTCACCAGGGATCATTGGTGCCATTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAGTATCTCGGACCCTTTCATGGGGTGATACTGATGCACATGATTCTTCCTTAGACAGCAAGGCAGAGGAACAAGAATGGCTTCTCCTTGTTGAGAAACTACTATCAGCAGCTGGACTTGATGATCAACTACAAAATGACTCCTTTGACACAAGATGGCATTCCCTTGAAAGCCCCTTGGACCCATCATTGAGGGGCAAATATGTCAATCTCAATGACAGGGAGCATCAGCATCTCAATGAGGCCAAGAGAAGGAAGATGAGATCAAGTCAGAAGCTCGTATTCGACTGCGTCAATGCGGCGATTTTGGAGCTGACTAATGGTGAGTGTGGACCAGGGAAGCACCACAAGTGCAGGGTGCACAGTAGTGGAACATGTTCCCTTTCTATGGACCACATTGTGGATCAAATGAAAGAGTTAATGGCAAGTGGAGTGAGGTGTGTTTGGGGGGATTGTGGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAAGAAAGAGCTTGTGGGGATTGGATGGGTTCAGCTTATGGAGTTGGAGATTGATATTTTGGGGATGGAGATTGAGAGGGATTTAATTCAAGAACTTGTGGAAAATGTTGTGGTTGATTTCACTGCCAGGGCCTCAATCAATCCCTTTTGA 2157 0.408 MLKAEENSNHKQPNVVAKLMGLDEALSRGEANLFLERNHEKCYSQHIYGHLRSPLKHWQVEDSVKDKEMVHDVLHSRTEQNAHNQDKMALIHQKFMEAKLMSRKSKKFEDGFKVLSSNNDALIRLLDSQNLYDLRRSASPAETELITLLRPAKTLDNNNRSSRMEKKKKNEGMEKNLEHNVPVQSTRIVVLKPSSGKTNDLKAMYSPKTSLPEDDFFESRKAKRELTCQRGETLFECSSNKSYYNYKDRRSFSDLDATMSQLPRHSWDHSLYSTRSLDRVTCSPESPVCIEAKSRLYERWIMMMTSSNTKFHHQEQIHVKRRSTLGELLSLSQRKKHVTPKVKDIIIEDQEPRKSRNEELMVNSAPKSRRIRLRDEVCDHDAGKGHGSKGMRLSFKGRVSSFLFLRKKKSTKEKSKDKSQCSSLYESDSVSNRKQQGIITLEHELIVSKPEISSENQDQPSPSSILEPLFQDDIHHDFYDSMKSGHQGSLVPLKSNLIDKSPPIESVSRTLSWGDTDAHDSSLDSKAEEQEWLLLVEKLLSAAGLDDQLQNDSFDTRWHSLESPLDPSLRGKYVNLNDREHQHLNEAKRRKMRSSQKLVFDCVNAAILELTNGECGPGKHHKCRVHSSGTCSLSMDHIVDQMKELMASGVRCVWGDCGDSNSLVVENVVKKELVGIGWVQLMELEIDILGMEIERDLIQELVENVVVDFTARASINPF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0962 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 4 214 - -
Amo12g0962 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 236 419 - -
Amo12g0962 718 Pfam Domain of unknown function (DUF4378) 536 703 IPR025486 -
Amo12g0962 718 PANTHER DUF3741 FAMILY PROTEIN 421 713 - -
Amo12g0962 718 PANTHER DUF3741 FAMILY PROTEIN 4 214 - -
Amo12g0962 718 PANTHER DUF3741 FAMILY PROTEIN 236 419 - -
Amo12g0962 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 421 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0962 Amo-Chr12 22365996 22370845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0962 84 710 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 34.446 3.29e-91 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0962 - - adu:107473982 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1592 16 29588710 29594420 Amo12g0962 12 22365996 22370845 PCT
Amo12g0962 12 22365996 22370845 Amo16g1592 16 29588710 29594420 PCT