Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0959 ATGGGTAATCAGAAGCAGATTCTCAAAGATCCCCAATTCGCACCCTTTCTCACTTCACGTTCCAAAATCAACCTCAAGGATAAGTGGCTAAATTTGAGCGTTAGCAATGGCACTCAAGGATCCAAAGAAAAATTTAGGATTCCTAGAATAAGGCTACGCCCCTGCTATGCTACCCGTGTCACGACTATGATTCATCAACCTGATCCTGATCCTTCTGTTACTGTGGGTGATCCTCTCAAAATGACGAAGATGCTAAGAATCCTCTGGGAAGCGATGTCAACTCTAAAAGATGCTAAATCTGACCTGAATGTCATTGTTAACTTCATTGAGATTGAGCTGAGGAAACCCCATTTGAGTTTGGTTGGTAATGCGAAAACAGTTGTGGAGACTTTAAATAAGGAGATTAAGGATGATCCTTTTTGTTTGGCCAGGAACCACCCTTGGGTGGAAGCTATATGGAAGAAGTCTAAGGATAATGCGGCAAAGATGGAGAATTAG 498 0.4217 MGNQKQILKDPQFAPFLTSRSKINLKDKWLNLSVSNGTQGSKEKFRIPRIRLRPCYATRVTTMIHQPDPDPSVTVGDPLKMTKMLRILWEAMSTLKDAKSDLNVIVNFIEIELRKPHLSLVGNAKTVVETLNKEIKDDPFCLARNHPWVEAIWKKSKDNAAKMEN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0959 165 Coils Coil 153 165 - -
Amo12g0959 165 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 2 111 - -
Amo12g0959 165 PANTHER SINGLE MYB HISTONE 4 2 111 IPR044597 GO:0003691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0959 Amo-Chr12 22267491 22268458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0959 2 110 Single Myb Histone (SMH) Gene Family AT1G17520 37.879 1.06e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0959 K12261 K09422 cit:102621022 98.5969