Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0951 ATGGATCTGAAGAACTGCTTCTTGCTACTCTTGTTGACGAGCTTCTTGGTTTGTGGTTGTTCGCAGGTTGAAGACGACGTGACTTGCCTGAAAGGCTTCAAGGACTCTCTGAGTGACCCTCAACAGAGACTCGCCAAGTGGAATTTGGAAAACAAGACAGCCGGTTCCGTCTGCAACTACGATGGTGTGTCATGCTGGAACCCGCAGGAGAATCGTATTATTGGTCTTGATCTTAGTGGGATGAATCTATCCGGTAAGATTCCGGAGTCCATCAAGTACTGCAGTAAGAATCTTCAGAAGCTCGTACTTGGATCCAACTCGCTCTCAGGTTCGATTCCTCCCAAGATCTGTGATTGGTTGCCGTATTTGGTCACACTGGACCTTTCTAACAACGATCTTTCTGGTCCTATTCCGGCTGCGTTAGAGAATTGTTCTTACTTGAACGAGTTAGAGATCTCCGATAACGACCTTTCGGGTCCTATTCCCGCTGAAATTGGGAGCTTGGTGAGGCTGAATAAGTTCTCGGTTGCTAACAATCATCTCACCGGCGCGATCCCTGGCTCTCTTTTGCGGTTTGGGAAGGAAGCCTTTGATGGGAATAGTGGGCTGTGTTCCAAGTGTGGTGGATTGAGCAAGAAGAATCTTGCCATTATTATTGCTGCTGGGGTGTTTGGTGCTGCGGTTTCGTTGTTGTTAGCTTTTGGGTTGTGGTGGTGGTACCATTTGGGATCGAGTAGGGATAAGAGAGGGTATGGCATTGGAAGCACTACCGATGGTGGTGATAATTGGGCTTTGAGTTTGAGGGGTCACAAGCTTGTTCAGGTTACTCTGTTTCAGAAGCCAATTGTGAAGGTCAAGTTAGGGGATTTGATGGCTGCAACTAATAACTTTAGTGCTGAGAATGTTCTTATGGCGACGAGGACGGGGACTACTTATAAGGCGGATCTTCGCGATGGGTCCACGCTCGCGGTGAAGCGGCTCAGTAAGTGTAAGATTGGGGAGAAGCAGTTTCGGATGGAGATGAATAGGCTAGGCCAGGTTAGGCACCCGAATTTGGCTCCCCTGTTGGGTTTCTGTGTGGTGGAAGATGAGAAGCTTTTGGTTTATAAGCACATGTCAAATGGGACTCTCTATAGCTTGTTGCATAAGAATCGTGGTGTGTTGGATTGGGAGATGAGGTTCAGAATTGGATTGGGCGCAGCAAGGGGCCTCGCGTGGCTACACCACGGGTGTCATCCTCCAATTATACAGCAGAATATCTGCTCCAATGTGATTCTTGTCGATGAAGATTTTGATGCTCGGATAATGGACTTTGGGCTTGCCAGGCTGTTGCAATCTGATACTAATGAGAGTAGTTTTGTTAATGGGGATCTGGGAGAACTTGGCTACGTTGCGCCGGAGTATCCGAGTACAATGGTTGCTTCTTTAAAAGGGGATGTTTATGGTTTTGGAATTGTGCTTCTGGAGTTGGCTACCGGTCGAAAACCTCTCGATGTCAACAATGTAGAGGAAGAATTTAAGGGTAATTTGGTGGATTGGGTGAACAAGCTTTCTAGTTCAGGTAGAGCAAAGGATTGCATTGATAAAGCTATATTTGGAAGGGGACATGACGAGGAGATACTCAAGTTCATGAAAATAGCGTCTAGTTGTGTAGTTCCTCACCCTAAGGAGAGGTTGTCTATGTTCGAGGTTTATAATTCCTTGAAGAGTATGGCAAAAGATCACAGTTTCTCTGAATATGATGATGAATTTCCATTGATCTTTGGTAAACCCGGAAATGAGAGGGCTTAG 1791 0.464 MDLKNCFLLLLLTSFLVCGCSQVEDDVTCLKGFKDSLSDPQQRLAKWNLENKTAGSVCNYDGVSCWNPQENRIIGLDLSGMNLSGKIPESIKYCSKNLQKLVLGSNSLSGSIPPKICDWLPYLVTLDLSNNDLSGPIPAALENCSYLNELEISDNDLSGPIPAEIGSLVRLNKFSVANNHLTGAIPGSLLRFGKEAFDGNSGLCSKCGGLSKKNLAIIIAAGVFGAAVSLLLAFGLWWWYHLGSSRDKRGYGIGSTTDGGDNWALSLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLMATRTGTTYKADLRDGSTLAVKRLSKCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEDEKLLVYKHMSNGTLYSLLHKNRGVLDWEMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARIMDFGLARLLQSDTNESSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGIVLLELATGRKPLDVNNVEEEFKGNLVDWVNKLSSSGRAKDCIDKAIFGRGHDEEILKFMKIASSCVVPHPKERLSMFEVYNSLKSMAKDHSFSEYDDEFPLIFGKPGNERA* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0951 596 ProSiteProfiles Protein kinase domain profile. 297 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0951 596 SUPERFAMILY Protein kinase-like (PK-like) 274 568 IPR011009 -
Amo12g0951 596 Gene3D Phosphorylase Kinase; domain 1 258 371 - -
Amo12g0951 596 SUPERFAMILY L domain-like 20 194 - -
Amo12g0951 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Amo12g0951 596 PANTHER RECEPTOR-LIKE PROTEIN 55 9 594 - -
Amo12g0951 596 Pfam Leucine rich repeat N-terminal domain 24 66 IPR013210 -
Amo12g0951 596 Gene3D Transferase(Phosphotransferase) domain 1 372 587 - -
Amo12g0951 596 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 594 - -
Amo12g0951 596 Gene3D Ribonuclease Inhibitor 23 209 IPR032675 -
Amo12g0951 596 Pfam Protein tyrosine and serine/threonine kinase 310 500 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0951 Amo-Chr12 21826188 21829374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0951 6 596 Receptor kinase-like Gene Family AT3G28450 62.810 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Amo12g0951 PK_Tyr_Ser-Thr 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0951 - - gmx:100810378 872.078