Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0947 ATGGATCCTCGACCAATTACACGATGTGGGTGCGGTGCACAAATAAAGGTTCATGTTGACCAAAGCACTAGCCGTTGGTTCGTAGAGAAGTTTTGTGACGAACACAACCATAAAATTCTAGATGCAAGGTTCTGGGGGTTGTTGCGTTCTCATAGAGTAATCAACGAAGGGGACATGCATCAAATTAACTCGATGAGAAAAACTCGGATGCGTGTGCGAACCATATTTCGTCATTTTCAGCACTATCTCGAGTTCATGAGAAGAAGAGCTAGTCGCCGATTATAG 285 0.4386 MDPRPITRCGCGAQIKVHVDQSTSRWFVEKFCDEHNHKILDARFWGLLRSHRVINEGDMHQINSMRKTRMRVRTIFRHFQHYLEFMRRRASRRL* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0947 94 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Amo12g0947 94 PANTHER OS02G0262500 PROTEIN 2 75 - -
Amo12g0947 94 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 75 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0947 Amo-Chr12 21598328 21599393 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g0947 FAR1 2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0947 - - aip:107633138 130.568