Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0930 ATGAATGTTTTAGAGGGCCTATGCCTTATCAAATTGGCACTGGCCTATGGTTTTCCTTCTCAACCATGGTATTTTCTCATCAAGAAAGAGTGGCCTGGAGAGCAATTATGGGTTTTTGTAGTTCAAATTCTGGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACGACTTCGCCCAGCATTTACAGATGTTCATCAACTCTTAAAGAATCAGTTGAATGTTGGTTATTTAGAAGCTTCTTTTGTTCATGAAATCTTGAAGGATTTGGGGTTCCATGAAAACCAGCTTAAGATATATAAATCTACAGAAGAATGCAATGATCTCTTCACAAAAGAAAGTGCTAATGGTGGTATCGATGCGGCGTTTGACGAAGTCCCTTATGTGATGCACCTTCTTGGAACTTATTGCTCCAAGTATGCGATGGTTGATCCAAGATTTAAAACTGGTGTTTTCAAAAGGGTCACTTCTAGTGGAGACATATCACGTGCAATCTTGAATGTGAGTGAAGGAGGCAAAATGAGAAGAATTGAGAATGCATGA 552 0.3913 MNVLEGLCLIKLALAYGFPSQPWYFLIKKEWPGEQLWVFVVQILVQSYTASLTSLLTVERLRPAFTDVHQLLKNQLNVGYLEASFVHEILKDLGFHENQLKIYKSTEECNDLFTKESANGGIDAAFDEVPYVMHLLGTYCSKYAMVDPRFKTGVFKRVTSSGDISRAILNVSEGGKMRRIENA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0930 183 PANTHER GLUTAMATE RECEPTOR 2.9 36 183 - -
Amo12g0930 183 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 183 - -
Amo12g0930 183 Gene3D - 35 104 - -
Amo12g0930 183 Pfam Ligand-gated ion channel 36 117 IPR001320 GO:0015276|GO:0016020
Amo12g0930 183 SUPERFAMILY Periplasmic binding protein-like II 46 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0930 Amo-Chr12 20885319 20886676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0930 36 182 Ion Channels AT5G11180 48.026 1.31e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0930 K05387 - rcu:8265217 186.037