Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0904 ATGAAGGTGCTTGTGTGGCTTGGCATTGTAATAAAGCTTGTTGTTCTGTCAAGCAAGGCCTCTGAAGCGGTTGAGCATCATTACGTGAATGCAAGTGATCTCAACTCATTGGAGGCACACGAAGCTGAAGCGTCCTTAGCTGGAAGGGGTGCCTACACTCTTATGGTAGCACTTACCCTTATTCAAACTGCTGCTGCTAAAGGAGCAGTTTGTTTGGATGGATCATTGCCTGGTTACCATTTACATCGAGGATATGGATCAGGAGCAAATAGCTGGATCGTTAATTTAGAGGGTGGAGGATGGTGTAATGATGTCAGGACATGCATTTATCGCAAGAAAACTCGGCGCGGATCTTCAYRATTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGCAATAAGGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAGATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGACAGTGAACATAAGGCTGCACGTCTGCAATTCCGAGGACAGCGCATTTGGATGGCTGCAATGGAAGATCTGATGTCGAAGGGAATGCGTTTTGCTCGGCAGGCTCTACTTTCCGGATGCTCAGCTGGTGGTCTGGCTACCATCATACACTGCGATGAATTCCGAGGTCTGTTTCCAAGGAGTACAAAAGTGAAATGTCTCAGTGATGCTGGGCTATTTCTTGATGCGACCGACGTATCTGGTGGACATACACTCAGGGATTTTTTCAGTGGTGTTGTAGGGTTGCAGGGAGTGCAGAAGAATCTGCCGCGTACTTGTACCAATCACCTTGATCCCACATCGTGCTTCTTCCCTCAGAACTTGATTGCCGGTATAAGAACCCCACTCTTCATTCTCAACACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCGACGACAGCGGACCCAAGTGGCAATTGGCACGATTGTAGAAAAGATTATTATAGGTGTTCTGGTTCACAGATCCAGTTTCTACAAGGTTTCAGGAATGAAATGTTGAATTCTATGAAAGGCTTCTCAAGATCAAATCAGAATGGAATGTTTATCAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCGGACAATTCTCCTGTCATTAGGGAAAAGGCAATTGCTCTGGCAGTTGGAGACTGGTTTTTCAACCGTGCTGTCGTTAAGGACATCGATTGTGCTTACCCTTGTGATAATACATGCCACAATCTGATCTTCAGATGA 1260 0.4508 MKVLVWLGIVIKLVVLSSKASEAVEHHYVNASDLNSLEAHEAEASLAGRGAYTLMVALTLIQTAAAKGAVCLDGSLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRTCIYRKKTRRGSSXFMEKEIPFTGILSNKAEQNPDFFNWNRVKIRYCDGASFAGDSEHKAARLQFRGQRIWMAAMEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGLFPRSTKVKCLSDAGLFLDATDVSGGHTLRDFFSGVVGLQGVQKNLPRTCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPTTADPSGNWHDCRKDYYRCSGSQIQFLQGFRNEMLNSMKGFSRSNQNGMFINSCFAHCQSERQDTWFADNSPVIREKAIALAVGDWFFNRAVVKDIDCAYPCDNTCHNLIFR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0904 419 PANTHER NOTUM-RELATED 53 418 IPR004963 GO:0016787
Amo12g0904 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Amo12g0904 419 PANTHER PECTIN ACETYLESTERASE 2 53 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0904 Amo-Chr12 19924801 19928994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0904 1 419 Carbohydrate Esterase AT1G57590 66.110 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0904 K19882 - gmx:100793403 692.189