Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0891 ATGGCTACTCTCACTTGTTCCGTTGCTGAGCTTCAATCACTTCTTATCAACAATGGAGGCAACACTTCCATAGCAACAGAAACTGCCAAATACATATGTGGAAGATTTGATGCTATCTCTAACAACTTTCTTGACACAAACCATGCAGTGGACAACACATACCTTCTCTTCTCTTCATACCTTGTCTTTGCCATGCAGCTTGGCTTCGCCATGCTGTGTGCCGGATCGGTTCGCGCCAAGAACACCATGAACATAATGCTTACTAATGTCCTTGACGCCGCCACCGGCGGCATCTTCTACTATCTTTTTGGCTTTGCCTTTGCCTTTGGCTCCTCGTCCAACGGTTTCATAGGCGAACATTTCTTTGGCCTAACGCAGTTCCCGTCCGAGTCCTTGTCCTTCGACTATGCAAACTTTCTTTTCCAATGGGCTTTCGCCATCGCCGCTGCCGGCATAACAAGTGGATCCATAGCTGAGAGGACGCAATTCGTTTCCTATTTGATATACTCTTCGTTCTTGACGGGGCTAGTTTACCCGGTCGTTTCGCATTGGTTTTGGTCGTCCGACGGTTGGGGAAGCCCTGCAAGGGCTGATCCAGGAACACTACTGTTTGGTTCGGGAGTCATTGATTTTGCTGGATCAGGTGTTGTTCACTTGGTTGGTGCTGTTGCTGGATTTTGGGGTGCCTTTATTGAAGGACCAAGGATTGGAAGGTTTAATCATGAGGGAAAAGCTGTGGCTATGAAGGGACATAGTGGTACTTTGGTTGTTTTGGGAACGTTCTTGTTGTGGTTTGGTTGGTACGGATTTAACCCTGGCTCGTTTCTCATCATCTCCAAGGCTTATGGTAAAAGTGGTTCTTTCTATGGACAATGGAGTGCAATTGGTAGGACTGCTGTGACAACAACACTTGCAGGTTGCTCAGCAGCATTGACAACTCTTTTTGGCAGACGTTTGCAAACTGGTCACTGGATTGTCACAGACGTTTGCAATGGCTTGCTTGGCGGATTCGCCGCCATCACTGCCGGCTGCTCTGTAGTAGACCCTTGGGCCGCAGTCATATGCGGATTCTTCGCGGCTTGGGTGTTGATTGGATGCAACATTCTAGCTGAGAAATTCAAGTATGATGATCCCTTGGAAGCCTTCCAACTCCACGGTGGATGCGGCGTCTGGGGGATCATTTTCACTGCGTTGTTCGCGAAAAAGGAGTATTTGAATGAGGTCTTTGGAGGGCCAATTGATAGGCCTTATGGTTTGYTRATGGGAGGAGGTGGAAGGCTTTTGGCTGCACATGTTRTTCAGATTTTGGTTATTGTTGGTTGGGTTAGTGTTACAATGGGARCGTTGTTCTTTGTTTTGCACAAGTTGAAGCTTTTGAGGATATCATCTGAAGAGGAGATGGAAGGTTTGGACTTAACTAGCCATGGTGGAATGGCTTATGAGTATCATCATGGTGAACTTGAGCTTCTACAGAAACGTTCGMTTGAAGGAACAAGGATAGATCCTTAG 1509 0.4692 MATLTCSVAELQSLLINNGGNTSIATETAKYICGRFDAISNNFLDTNHAVDNTYLLFSSYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFAFAFGSSSNGFIGEHFFGLTQFPSESLSFDYANFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPVVSHWFWSSDGWGSPARADPGTLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRIGRFNHEGKAVAMKGHSGTLVVLGTFLLWFGWYGFNPGSFLIISKAYGKSGSFYGQWSAIGRTAVTTTLAGCSAALTTLFGRRLQTGHWIVTDVCNGLLGGFAAITAGCSVVDPWAAVICGFFAAWVLIGCNILAEKFKYDDPLEAFQLHGGCGVWGIIFTALFAKKEYLNEVFGGPIDRPYGLLMGGGGRLLAAHVXQILVIVGWVSVTMGXLFFVLHKLKLLRISSEEEMEGLDLTSHGGMAYEYHHGELELLQKRSXEGTRIDP* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0891 502 Pfam Ammonium Transporter Family 55 480 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo12g0891 502 Gene3D Ammonium transporter AmtB like domains 32 494 IPR029020 -
Amo12g0891 502 ProSitePatterns Ammonium transporters signature. 210 235 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo12g0891 502 PANTHER AMMONIUM TRANSPORTER 1 487 - -
Amo12g0891 502 SUPERFAMILY Ammonium transporter 48 461 - -
Amo12g0891 502 PANTHER AMMONIUM TRANSPORTER 1 487 - -
Amo12g0891 502 TIGRFAM amt: ammonium transporter 51 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0891 Amo-Chr12 19583512 19585968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0891 4 502 Inorganic Solute Cotransporters AT4G13510 70.060 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0891 K03320 - twl:120007420 749.584