Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0890 ATGGTTGCGAAATTTGAGGGTAGAGCTTATCTCGCTTCCTTTGTTGATGCTGTTTTGAACAAGCTATCTTCTGTCAACTCAACCCCAATAGCAAGGAAGCTAGCTGACCAGAAGTTGCTTCAAAAGTTGAAGGCATGTCTCCGTGCCGTTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCAAAGACCAAGAAGTGAAGAAGTGGCTTGTTGATCTCCAAGATTCTCTCTATATGGCTGATGACTTGCTTGATGAACTCTGTACTAAAGCTGCCACTGCCACTCCCATTCAAAGGGATCCAGGTAACTCTTCTTCCTGGTCTCACTATGTTGATTCAATCGTGGAATACTGTGATGTTGATGARATGGGGGTAGTAAATAGCACGCAAGACATAGTTGATAAACTGGAGTCTATTGTTGAAGAGAAAGATGATCTTGGTCTAAAAGAAGAGATTGCCAAAGATCTGGRGGACATGTCATGGAGAATTCAATCATCTCTAGTTGAAAGTTCTGAGATATTTGGAAGGGATAATGACAAAGAAGCCATCATAGAATTGTTGTTAGATGATACCTGTGATGCTAACATATCTGTGATTCCCATTGTGGGAATGGGCGGAGTTGGAAAAACTACCTTGGCTCAGTTGGTTTACAATGATGTCAGAGTGGAGAGGAAATTCGACAYTAGAGCATGGGTGTGTGTTTCYGACCAATTTGACATTGCYAAGGTTACAAAGACCTTAATAAAAGCAGCAGGAKCTAGTTCTTGTAACGAGGATGATTTGAGTTTACTTCAAACTGGSTTGAAGGAYAAGTTAATGGGGAAGAAATTCTTAATTGTTTTGGATGATGTGTGGATTGATAATTCCAGAAACTGGAAAAGTCTTCAAAAACCTTTTCAATATGGGAAAAAGGGAAGCAAGGTTATTGTAACAACTCGAAATGATAATGTTGCCGATGTAGTGAAAACTATTTCAGCATACAAGCTTGGTTTATTGTCAGAGAAAGATTGTTGGTCACTTTTTGTGAAACGTGTATTTCTTTCTACTGCATCGAAGGAGTATTCAACTCTAGAATCGGTTGGTCGAGAACTTGTCAAAAAGTGCAAAGGGCTACCTTTGGCGGTAGAGGCCCTTGGTTCCTTATTACGTACAATAAACTATGATGAAAGGGATTGGGATAGTGTATTGAAAAGTGAACTATGGGAAGTTTTTGAAGATCAGAATGAYGAGATTATTCCTGCCCTAAAAATTAGCTATCATTACCTTCCTTCAAATCTAAAGCGATGCTTTGTTTATTGTTCTTTGTTTCCAAAGGATTTTGAATTTGATAAAGATGAGCTGGTCTTGCTATGGATGGCAGAAGAACTTTTACATCCAAAAGGAAAAAAGACTCTGGAAGAAACTGGTTGTGAATATTTCGATCAATTGGTTGCGAGATCCTTTTTTCAGTCCTCTAGCACTGATGACAGCTTCTATGTGATTCATGATATCATGCATGATTTGGCAACAATTTATGCTGGAGGATTCTATTTTAGAGCTGAAAAACATGAAGAAAACATCGGGATCAGCAATAAAACTCGTCATTTATTGCATAACTCAAGAGGAAACTATCCCTTCTCGCAACTCGTGGAAGCTTGTGGTAGAGTAAAAGATGTGAGGACATTTCTTGAAATAAATTTGGGTCTAAAGGATCCGTTCAATATGGAAAATGCTCCTCATGTCTTTGTATCAGAGTTGAAGTGCTTAAGAGTTTTGTCATTTAATACCTTTCCTCTTTATTCATTACCCGATTCAATAGGTGAATTGATTTATCTGCGTTATCTGGATCTCTCGAATACACCTATAGAGACATTGCCTGAGGAATTGTGTAATCTGTACAATCTACAGACATTGAAGTTGAATGATTGTCATTTGCTAATGGAGCTACCCAAGAATATGCAAAATCTTGTAAATTTACGTCATCTTGATATTGAAGGAGCTGGTCTTAAAGAGATGCCCAAAGGAATAAGCAAAATGAAGGATTTGCAGTTTTTAAGTGACTACATCGTCGGCAAGCATGCAGAGAATAATGGAATTAAAGAATTGGGAGCTCTCACAAATATTCAGGAGTCGCTTCGCATTTGCCAACTAGAGAATGTCATTGATGGTGATCAAGCTTCGGAGGCAAGAATTGCCGAGAAGAAGAAGATTAGGCATCTATATTTGACTTGGTCATCAAACAATCATATGGCTGATTCTCAAGATATACTCAACAATTTAAGGCCTCACACAAACCTGAGAGAGCTATCAATCGATGACTACAAGGGTCAAACATTTCCAAATTGGCTAGGACATTCTTCCTACAGAAACATGACCGAAATCTACTTGGATGGCTGCAGCAATTGTCTTGAGCTTCCTTCACTTGGACAGCTACCCTCTTTGAAGCACTTGTTTCTCAGCGAGTTTTTCAAGTTAACGCGCATCGGTGCCGAGTTTTACAAAGATGATGAATCTTCTTCTTCTTGTGGGGCGCCCTTTCCAATGCTTGAAACTCTCAGTTTTTATAACATGTATCATTGGGAGGAGTGGCTTTCAGTTTCATCTGAGTTTGAGTTGGATGCTTTTCCTCGGCTTAGGGTGCTATCAATGCGATACTGTCCTAAGTTAAGGGGAGATTTGCCCATCCAACTACCTGCTCTGGAAAGCCTTTGCATTCGTCAATGTGACCAACTTGCTTTCACTCTTCCAAGAGCAGATGCAATGCTAGAGTTATCTGTTGAAGGAACCCAACGAGTAGAGGCGGTGTTTGAGGCCATTGGACGCAACCAACTAAACTGTCTACAATCTTTAAGCATCTCAAGATGTCGTTCGTCCATATCATTTCCCGGAGCATGTTTGCCCTCTGCATTGCAAAACTTGGACATTCATGGTTGTCCGTATCTAGAGTTCCCAATGCCGCCACAACAGCAGCAGCACGAGTCGTTGCAGTCATTATCAATATCCAGCAGTTGTTGTTCTCTCGTGTCCTTCTCATTCACAAGCTTTCCAAATTTAACTAAAATTACAATTTCATCCTGTAAAAATATGAGGTCTATTGAGACATCAGATCCTACTGCTGCTTCATCTTCAAGTCTCTGCTCTTTACACATCGACAACTGCCCTAGTTTTGAGTCTTTCCAGATGGTTGCACCCCAACTAGAATATCTCTTCCTAAGAGATTGCCCAGAAATTGAATCGTTCTTCGAAGGGGGTTTGCCACCTAACCTGAGAGAGCTTCAAATCCAGAGTTGCAAGAAGCTGGTGACATACCTAGCATCCATGGACTTGTGTGATCACTGTCTTACACATCTTGACATTGAACATCCTTATGATAACATCAATATCTTTCCCATGGACGGTTGCCTGCCGCCCTCCCTTGAGAGACTCCATCTGCGAAGCTTTCCAACTCTAGAAATCTTGGACTGCAAGGGACTTGACAATCTCCAGAAGCTATTGATAGATCGTTGTCCCAACCTCCAGGATGTTGCGGGGAAAAGCTTTCCTTCCTCTCTGTCAATGCTCGCCTTCAGTCGAGGTTCTTTGCTGCGGAGACGGTGGCAGAAGAAGGACCCGTTAATTTTGTCCAAAATGTCCCACGTCCGCAACATCAATGTTGATGGATATTGGATTTCATGA 3657 0.4085 MVAKFEGRAYLASFVDAVLNKLSSVNSTPIARKLADQKLLQKLKACLRAVRPVLDDAEQKQIKDQEVKKWLVDLQDSLYMADDLLDELCTKAATATPIQRDPGNSSSWSHYVDSIVEYCDVDEMGVVNSTQDIVDKLESIVEEKDDLGLKEEIAKDLXDMSWRIQSSLVESSEIFGRDNDKEAIIELLLDDTCDANISVIPIVGMGGVGKTTLAQLVYNDVRVERKFDXRAWVCVSDQFDIAKVTKTLIKAAGXSSCNEDDLSLLQTGLKDKLMGKKFLIVLDDVWIDNSRNWKSLQKPFQYGKKGSKVIVTTRNDNVADVVKTISAYKLGLLSEKDCWSLFVKRVFLSTASKEYSTLESVGRELVKKCKGLPLAVEALGSLLRTINYDERDWDSVLKSELWEVFEDQNDEIIPALKISYHYLPSNLKRCFVYCSLFPKDFEFDKDELVLLWMAEELLHPKGKKTLEETGCEYFDQLVARSFFQSSSTDDSFYVIHDIMHDLATIYAGGFYFRAEKHEENIGISNKTRHLLHNSRGNYPFSQLVEACGRVKDVRTFLEINLGLKDPFNMENAPHVFVSELKCLRVLSFNTFPLYSLPDSIGELIYLRYLDLSNTPIETLPEELCNLYNLQTLKLNDCHLLMELPKNMQNLVNLRHLDIEGAGLKEMPKGISKMKDLQFLSDYIVGKHAENNGIKELGALTNIQESLRICQLENVIDGDQASEARIAEKKKIRHLYLTWSSNNHMADSQDILNNLRPHTNLRELSIDDYKGQTFPNWLGHSSYRNMTEIYLDGCSNCLELPSLGQLPSLKHLFLSEFFKLTRIGAEFYKDDESSSSCGAPFPMLETLSFYNMYHWEEWLSVSSEFELDAFPRLRVLSMRYCPKLRGDLPIQLPALESLCIRQCDQLAFTLPRADAMLELSVEGTQRVEAVFEAIGRNQLNCLQSLSISRCRSSISFPGACLPSALQNLDIHGCPYLEFPMPPQQQQHESLQSLSISSSCCSLVSFSFTSFPNLTKITISSCKNMRSIETSDPTAASSSSLCSLHIDNCPSFESFQMVAPQLEYLFLRDCPEIESFFEGGLPPNLRELQIQSCKKLVTYLASMDLCDHCLTHLDIEHPYDNINIFPMDGCLPPSLERLHLRSFPTLEILDCKGLDNLQKLLIDRCPNLQDVAGKSFPSSLSMLAFSRGSLLRRRWQKKDPLILSKMSHVRNINVDGYWIS* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0890 1218 PANTHER DISEASE RESISTANCE PROTEIN RP 23 954 IPR044974 GO:0006952
Amo12g0890 1218 Gene3D - 419 505 IPR036388 -
Amo12g0890 1218 PRINTS Disease resistance protein signature 624 640 - -
Amo12g0890 1218 PRINTS Disease resistance protein signature 199 214 - -
Amo12g0890 1218 PRINTS Disease resistance protein signature 272 286 - -
Amo12g0890 1218 PRINTS Disease resistance protein signature 369 383 - -
Amo12g0890 1218 Gene3D Ribonuclease Inhibitor 551 919 IPR032675 -
Amo12g0890 1218 Pfam Rx N-terminal domain 14 95 IPR041118 -
Amo12g0890 1218 SUPERFAMILY RNI-like 840 1113 - -
Amo12g0890 1218 Gene3D - 154 327 IPR027417 -
Amo12g0890 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 434 IPR027417 -
Amo12g0890 1218 PANTHER OS05G0414200 PROTEIN 23 954 - -
Amo12g0890 1218 Gene3D - 332 418 IPR042197 -
Amo12g0890 1218 SUPERFAMILY L domain-like 495 906 - -
Amo12g0890 1218 Gene3D Ribonuclease Inhibitor 920 1187 IPR032675 -
Amo12g0890 1218 Pfam NB-ARC domain 178 421 IPR002182 GO:0043531
Amo12g0890 1218 Gene3D - 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0890 Amo-Chr12 19577851 19582236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0890 196 380 WRKY Transcription Factor Family AT5G45050 26.842 9.81e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0890 - - adu:107475166 1719.13