Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0889 ATGGACGCAGGTAGGAGAAGACTTCCTCATGCACTAGGGCATATTGGGAGGAACAACGATGTTGTRCGKGTTATCAAACCGGCTGGGGASCCGTCYCAACCACTGATCACYCTCGAAYGGGGGTGGGAAAGGTTTTATRGTGARTACAAGCTTCGTCCRAATGACSTTCTGCTYTTGAAGCACAAGGGCCTCGATGACTTRGATGTGCGTATCTTTGAATCACCTGGAGTGGAGAGGTCTTACGTTCCATCTGGAGGTGAATCCAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCTTCCAAACACTCCTCCACTGCATCAGCCTCGAACGGGTTGCATCAATATTCCTAGGAGCGCGGCTGCGTCTGAGGTGGCACAGACATTTCACTCTGATCACCCATTCTTTGTAATGCACATCACAAGAAGGCTATTAGGTGTCCACTTCCTGATAAGTATACCAAATGTACCACACTTTGGCCACGACGTTGGTGACAATGTCATGGTCACTCTGCGTGCAGGGGATATCTCTGTTCGAGCAGCCTACAGCCGATACGGGGGCAAGCGAAGAGGCAACTATGGCACCATCACAGGAGGCTGGGGGGAATTCTTGAAGCTGTGCAATATCAACGATGATCAATTGGCTATTTTTGAGATATCGAGGACTAACCCGGAGGTGGTGCTCTTGGTTCAGTTTGTTGATTATGAGTAA 711 0.4895 MDAGRRRLPHALGHIGRNNDVVRVIKPAGXPSQPLITLEXGWERFYXEYKLRPNDXLLLKHKGLDDLDVRIFESPGVERSYVPSGGESSNRGTPQVPNTLPNTPPLHQPRTGCINIPRSAAASEVAQTFHSDHPFFVMHITRRLLGVHFLISIPNVPHFGHDVGDNVMVTLRAGDISVRAAYSRYGGKRRGNYGTITGGWGEFLKLCNINDDQLAIFEISRTNPEVVLLVQFVDYE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0889 236 MobiDBLite consensus disorder prediction 80 112 - -
Amo12g0889 236 SUPERFAMILY DNA-binding pseudobarrel domain 35 79 IPR015300 -
Amo12g0889 236 SUPERFAMILY DNA-binding pseudobarrel domain 129 223 IPR015300 -
Amo12g0889 236 Gene3D - 117 235 IPR015300 -
Amo12g0889 236 MobiDBLite consensus disorder prediction 83 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0889 Amo-Chr12 19513298 19514635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0889 35 222 B3 DNA Binding Superfamily AT5G25475 24.752 6.79e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0889 - K07114 adu:110277012 403.29