Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0885 ATGGACGAAGCTAGGAGAAGACCTCCTCATGGACTAGGGCATATTGGGAGGAACAACGATGTTGTCCGAATTATCAAACCGGCTGGAGAACCATCGCGACCACTGCACATACCCTTCCCAAATGATCTCCTCCCGAAATCTAGCAAACATGTGTACCTAACAGTCTCCGACGGGGTGCAGAGAATATACAAGATTGGATGTAGCTCGAACGTCTTGGGTGAGATCACGCTCGAAGGGGGGTGGGAAAGGTTTTATCGTGACTACAAGCTTCGTCCCAATGACTTTCTGCTGTTGAAGCACAAGGGCCTCGATGACTTTGATGTGCGTATCTTTGAATCACCTGGAGTGGAGAGGTCTTACGTTCCGTCTGGAGGTGAATCTAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCTTCCAAACACTCTTCCACTGCATCAGCCTCGAACGGGTTGTATCAATATTCCTAGGAGCGCGGCTGCATCTGAGGTGGCACAGACATTTCGCTCTGATCACCCATTCTTTGTAATGCACATCACAAGAAGGCTATTACGTGTCCACTTTCTGCCAAATGTACCACACTTTGGCCACGACGTTGGTGACAATGTCATGGTCACTCTGCGTGCAGGGGATATCTCTGTTCGAGCGGCCTACAGCCGATATGGGGGCAACCGAAGAGGCAACTATGGCACCATCACAGGAGGCTGGGGGGAATTCGTGAAGCTGTGCAACATCAACGATGATCAATTGGCTGTTTTTGAGATATCGAGGACTAACCCGGAGGTGGTGCTCTTGGTTCAGTTTGTTGATTATGAGTAA 819 0.4994 MDEARRRPPHGLGHIGRNNDVVRIIKPAGEPSRPLHIPFPNDLLPKSSKHVYLTVSDGVQRIYKIGCSSNVLGEITLEGGWERFYRDYKLRPNDFLLLKHKGLDDFDVRIFESPGVERSYVPSGGESSNRGTPQVPNTLPNTLPLHQPRTGCINIPRSAAASEVAQTFRSDHPFFVMHITRRLLRVHFLPNVPHFGHDVGDNVMVTLRAGDISVRAAYSRYGGNRRGNYGTITGGWGEFVKLCNINDDQLAVFEISRTNPEVVLLVQFVDYE* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0885 272 MobiDBLite consensus disorder prediction 119 138 - -
Amo12g0885 272 Gene3D - 156 271 IPR015300 -
Amo12g0885 272 MobiDBLite consensus disorder prediction 122 138 - -
Amo12g0885 272 SUPERFAMILY DNA-binding pseudobarrel domain 38 113 IPR015300 -
Amo12g0885 272 Gene3D - 19 114 IPR015300 -
Amo12g0885 272 PANTHER B3 DOMAIN-CONTAINING 42 265 - -
Amo12g0885 272 SUPERFAMILY DNA-binding pseudobarrel domain 169 259 IPR015300 -
Amo12g0885 272 CDD B3_DNA 43 111 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0885 Amo-Chr12 19456543 19457880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0885 36 135 REM Transcription Factor Family AT4G31650 32.381 3.72e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0885 - - adu:110277012 499.204