Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0880 ATGAATTTGAATCTAACGAAGTTCCTGAGACGTTCGGGTGTAGATCAGAATTTTTTGGGTGTATTTTTGGGGGAAGTGTGGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCCAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAAGAACTACGCCAAGGCTGCAGGWTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAATTGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGCCGGTTTAAACTATCCTACAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAACATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCT 492 0.4187 MNLNLTKFLRRSGVDQNFLGVFLGEVWPLSVVDDQFVPKVGMTFTTLEDAGKFYKNYAKAAGFSTRVRSTNRKGNEIKNQLITCSREGNWKSKISPTEKTNPTAGLNYPTRIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELNMSIRRTIENNEEA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0880 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 149 - -
Amo12g0880 164 Pfam FAR1 DNA-binding domain 52 137 IPR004330 -
Amo12g0880 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 35 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0880 Amo-Chr12 19324061 19324950 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g0880 FAR1 5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0880 - - adu:110280446 264.618