Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0879 ATGGCCTCAGGTAGGAGAAGACCTCCTCATGCACTAGGGCATATTGGGAGGAACAACGATGTCGTCCGAGTTATCAAATCGGCTGGGGATCCGTCGCGACCACTGCATATACCCTTCCCAAATGATCTCCTCCCGAAATCTAGCAAACATGTATACCTAACAGTCTCCGACGGGGTGCAGAGAACATACAAGATTGGATGTAGCTCGAACGTCTTCGGTGAGATCACGCTCGAAGGGGGGTGGGAAAGGTTTTATTGTGACTACAAGCTTCGTCCCAATGACATTCTGCTGTTGAAGCACAAGGGCCTCGATGACTTTGATGTGCGTATCTTTGAATTATCCGGAGTGGAGAGGTCTTATGTTCCGTCTAGAGGTGAATCCAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCCTCCAGTGCATCTGCCTCGAACGGGTTGCATCAATATTCCTAGGAGCGCGGCTGCGTCTGAGGTGGCACAGACATTTCGCTCTGAACACCCATTCTTTGTAATGCACATCACAAGAAGGCTATTACTTGTCCACTTCCTGCCAAATGTACCACACTTTGGCCACGACGTTGGTGACAATGTCATGGTCACTCTGTGTTCAGGGGATATCTCTGTTCGAGCGGCCTACAGCCGATACGGGGGCAAGCGAAGAGGCAACTATGGCACCATCACAGGAGGCTGGGGGGAATTCGTGAAGCTGTGCAACATCAACAATGATCAATTGGCTATTTTTGAGATATCGAGGACTAACCCGGAGGTGGTGCTCTTAGTTCAATTTTTTGATTATGAGTAA 807 0.4969 MASGRRRPPHALGHIGRNNDVVRVIKSAGDPSRPLHIPFPNDLLPKSSKHVYLTVSDGVQRTYKIGCSSNVFGEITLEGGWERFYCDYKLRPNDILLLKHKGLDDFDVRIFELSGVERSYVPSRGESSNRGTPQVPNTPPVHLPRTGCINIPRSAAASEVAQTFRSEHPFFVMHITRRLLLVHFLPNVPHFGHDVGDNVMVTLCSGDISVRAAYSRYGGKRRGNYGTITGGWGEFVKLCNINNDQLAIFEISRTNPEVVLLVQFFDYE* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0879 268 MobiDBLite consensus disorder prediction 122 136 - -
Amo12g0879 268 PANTHER B3 DOMAIN-CONTAINING 41 265 - -
Amo12g0879 268 Gene3D - 152 268 IPR015300 -
Amo12g0879 268 Gene3D - 20 115 IPR015300 -
Amo12g0879 268 SUPERFAMILY DNA-binding pseudobarrel domain 37 114 IPR015300 -
Amo12g0879 268 MobiDBLite consensus disorder prediction 122 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0879 Amo-Chr12 19305641 19306966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0879 36 135 REM Transcription Factor Family AT4G31650 32.381 5.29e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0879 - - adu:110277012 505.368