Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0865 ATGCAACTGAAAACACAGTTTTCATTCCTTCTCATCATCATACTCATATGCTATACCATTGGTTCATTCTCTTCTTGTTTTGCTCATAACGATGAAACATCTGCATTGCTTTCCATAAAACAAGGTCTCATTGATCCATTCAACAGCCTCAAGGATTGGAAACTGCACGGTGCAGTTCCAGTTCATCACTGTAACTGGACTGGTGTATGGTGCAACTCAAATGGATCCGTTCAAAAGCTTGAYCTCTCTCACATGAATCTCACTGGCACTGTTTCCAACGACGTAACAAAACTCAAGAGCCTCACTTCTCTCAACTTCTGCTGCAATGGATTCAACTCATCACTCTTCAAATCCGTAGTTAGCGTCACCACACTGAAGGTTCTTGACGTGAGTCAGAATTTCTTCACCGGCGAGTTTCCAATTCCAACGGTTTCTTCGCAGCTTGTGACTCTGAATGCGTCAAGCAACAATTTCTCAGGTTTGATTCCAGAGGAGATTGGAAATCTTTCTTTGTTGGAAACACTTGATCTTAGAGGAAGCTTCTTCGAAGGTTCCATTCCTAAATCGTTTGGTGAACTGCGAAATTTGAAGTATCTCGGACTCTCCGGGAACAATCTCACCGGCGAAATTCCGGCGGAGATCGGAAAATTGTCTTCCCTGGAGTTTATGATAATCGGATACAACGAATTCGACGGTGGAGTTCCGTCGGAATTCGGTAACCTCACGAATCTGAAGTATCTTGATATAGCAGAAGGGAATCTTGGCGGTGAAATTCCAAAAGAGTTGGGGAAACTCAAGTTTTTGGAGACGGTTTTCTTGTACAAGAACAGTTTTGGCGGGAAAATTCCGCCGGAAATCGGAAACATGAGTTCGTTAATGTTCTTGGATCTTTCGGATAACATTTTATCTGGAAAGATTCCAGATGAAATTAGTCAGCTCAAGAATCTTCAGCTACTGAATCTGATGCGAAACCGGTTAACCGGTCCGGTTCCGGCCGGCATCGGAGATTTGAATCATTTGCAGGTTCTTGAGCTTTGGAACAATTCATTGACAGGGACATTGCCTAGAAACCTTGGAAAGAATTCACCATTGCAGTGGTTAGATGTATCATCCAACTCAYTCTCTGGTGAGATTCCAGAGAATCTTTGCACCATGGGGAATCTTACCAAGCTTATACTCTTTAATAACGGTTTCTTTGGTCCAATTCCAGCAAGTTTATCCTCGTGTTCTTCCCTCGTTCGCGTTCGRATTCACAACAATTTTCTTTCAGGGACGATTCCTATTGGTTTTGGCAAGCTTAAGAAGATTCAGAGATTGGAACTGGCTAACAATACTCTCACCGGTGGAATTCCGGATGACATTGCTTCTTCAACGTCGCTTTCTTTCATTGATTTCTCAAGAAACAAGCTCTGTTATTCGCTTCCTTCGATGATTTTCTCCATTACAAATCTTCAGACCTTCATTGTTTCCAACAACAACTTGGAAGGAAAAATACCAGATCAGTTGCAGGACTGTCCCTTGCTTGGTGTCCTTGATCTCTCTTSSAATTGCTTATCTGGAAGMATTCCGGSTAGCATTGGTTCGTGTAAGAAATTGGTGAGATTAAACATGCAGAACAACCAATTGACTGGAGAAATTCCGAAAGCAATAGCGAGCATGCCTACATTGTCCATTCTTGATCTTGCTAACAATTCTCTGACTGGTAAAATACCTGAAAACTTTGGTATGTCGCCGGCGTTGGAAACATTCAATGTTTCGTACAATAAGCTAGAAGGCCCTGTCCCTGCAAATGGTGTGCTAAGAGCGATTAATCCGAATGATCTCGCTGGCAATGCCGGCCTCTGTGGTGGTGTTCTCCCTCCATGTGCCAAATCCTCTTCATATTCGTCAAGCCATGGAAATTCATATACAAAGCATATTGTTCTAGGATGGATCATTGGAGTATCAACAATCTTTGCTGTTGCCATTGCGATTTTAGCTGCAAGATCATTATACATGAGATGGTACACCAATGGATTGTGCTTCTTCCCAAATGGATTTTATAAGGGTAACAAACGGTGGCCGTGGCGATTGATGGCATTTCAGAGGGTTGATTTTACAAGTACTGATATTCTGTCCTGCGTCAAGGAAACAAATGTGATTGGAATGGGGGCAACCGGCGTTGTCTACAAGGCCGAGATAGCACAATCAAGTACCGTTGTTGCAGTCAAGAAATTGTGGAGATCAGGATCTGATATTGAAGTGGGAAGCAGCGATGATCTTGTCGGCGAGGTGAATCTTCTAGGGAGGCTAAGGCATAGGAACATTGTTAGGCTATTAGGATTTCTTTATAATGACACTGATTTGATGATCATTTATGAGTTTATGCACAATGGAAACCTTGGGGATGCCTTGCATGGCAAGCAAGCTGGAAGATTGCTTGTGGATTGGGTTTCGAGGTATAACATTGCTCTGGGAGTCGCGCAGGGGCTCGCTTATCTTCACCATGATTGTCATCCGGCCGTTATCCATCGAGACATCAAGTCGAGTAACATACTGCTCGACATGAATCTCGAGGCAAGAATAGCTGATTTCGGGTTAGCCAAGATGATGATGCATAAGAATGAAACTGTCTCCATGATTGCTGGATCCTACGGATACATTGCCCCAGAATATGGATACTCATTGAATGTGGATGAAAAGATAGATATCTACAGTTATGGAGTAGTATTACTGGAGCTTCTAACAGGAAAGAGGCCCTTGGATCCAGAATTTGGAGAATCAATAGATATAGTAGGGTGGATTAGAAGGAAAATAGAGAATAAATCCTTAGAAGAAGCATTAGACCCTAGTGTAGGAAGCTCCAAGCATGTTCAAGAAGAGATGCTTTTGGTTCTCAGAATAGCACTTCTTTGCACTGCAAAACTACCAAAAGATCGACCCTCCATGAGAGATGTGATAATGATGCTCGGAGAAGCAAGGCCAAGGAGGAAGAGTGCTATGAGCAGTGAAACTTTTGAAGCTAACAAGGAAATGCAAAATATTAGCACTTCACCAGTTAGTGGCCTTATTTGA 3054 0.4257 MQLKTQFSFLLIIILICYTIGSFSSCFAHNDETSALLSIKQGLIDPFNSLKDWKLHGAVPVHHCNWTGVWCNSNGSVQKLDLSHMNLTGTVSNDVTKLKSLTSLNFCCNGFNSSLFKSVVSVTTLKVLDVSQNFFTGEFPIPTVSSQLVTLNASSNNFSGLIPEEIGNLSLLETLDLRGSFFEGSIPKSFGELRNLKYLGLSGNNLTGEIPAEIGKLSSLEFMIIGYNEFDGGVPSEFGNLTNLKYLDIAEGNLGGEIPKELGKLKFLETVFLYKNSFGGKIPPEIGNMSSLMFLDLSDNILSGKIPDEISQLKNLQLLNLMRNRLTGPVPAGIGDLNHLQVLELWNNSLTGTLPRNLGKNSPLQWLDVSSNSXSGEIPENLCTMGNLTKLILFNNGFFGPIPASLSSCSSLVRVRIHNNFLSGTIPIGFGKLKKIQRLELANNTLTGGIPDDIASSTSLSFIDFSRNKLCYSLPSMIFSITNLQTFIVSNNNLEGKIPDQLQDCPLLGVLDLSXNCLSGXIPXSIGSCKKLVRLNMQNNQLTGEIPKAIASMPTLSILDLANNSLTGKIPENFGMSPALETFNVSYNKLEGPVPANGVLRAINPNDLAGNAGLCGGVLPPCAKSSSYSSSHGNSYTKHIVLGWIIGVSTIFAVAIAILAARSLYMRWYTNGLCFFPNGFYKGNKRWPWRLMAFQRVDFTSTDILSCVKETNVIGMGATGVVYKAEIAQSSTVVAVKKLWRSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDLMIIYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGVAQGLAYLHHDCHPAVIHRDIKSSNILLDMNLEARIADFGLAKMMMHKNETVSMIAGSYGYIAPEYGYSLNVDEKIDIYSYGVVLLELLTGKRPLDPEFGESIDIVGWIRRKIENKSLEEALDPSVGSSKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEARPRRKSAMSSETFEANKEMQNISTSPVSGLI* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0865 1017 PANTHER UNNAMED PRODUCT 20 997 - -
Amo12g0865 1017 ProSiteProfiles Protein kinase domain profile. 708 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0865 1017 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Amo12g0865 1017 Gene3D Phosphorylase Kinase; domain 1 708 792 - -
Amo12g0865 1017 SUPERFAMILY RNI-like 255 595 - -
Amo12g0865 1017 SUPERFAMILY L domain-like 62 308 - -
Amo12g0865 1017 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Amo12g0865 1017 Pfam Leucine rich repeat 482 542 IPR001611 GO:0005515
Amo12g0865 1017 Gene3D Ribonuclease Inhibitor 333 630 IPR032675 -
Amo12g0865 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Amo12g0865 1017 SUPERFAMILY Protein kinase-like (PK-like) 699 983 IPR011009 -
Amo12g0865 1017 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 997 - -
Amo12g0865 1017 SMART serkin_6 708 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0865 1017 Gene3D Ribonuclease Inhibitor 145 234 IPR032675 -
Amo12g0865 1017 Pfam Protein kinase domain 710 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0865 1017 Gene3D Ribonuclease Inhibitor 235 332 IPR032675 -
Amo12g0865 1017 Gene3D Ribonuclease Inhibitor 31 144 IPR032675 -
Amo12g0865 1017 SMART LRR_typ_2 553 576 IPR003591 -
Amo12g0865 1017 SMART LRR_typ_2 289 313 IPR003591 -
Amo12g0865 1017 SMART LRR_typ_2 337 361 IPR003591 -
Amo12g0865 1017 SMART LRR_typ_2 193 217 IPR003591 -
Amo12g0865 1017 Gene3D Transferase(Phosphotransferase) domain 1 793 1011 - -
Amo12g0865 1017 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
Amo12g0865 1017 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0865 Amo-Chr12 18909499 18913199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0865 24 1017 Receptor kinase-like Gene Family AT1G08590 59.136 0.0 1131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g0865 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0865 - - gmx:100788430 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0865 12 18909499 18913199 Amo12g0865 12 18909499 18913199 ECH