Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0847 ATGATGCCGTGTTATGCCCCTTCTTTCTGTCCCTACCTGGTAACTCCACCGTCCACCTCCGTCCACGGCGGTTCCCATCACCGGAGACCGACCAAACGCAACGTCACCATCCTCTACCCAAAAATGTCCCTAAACAACAACAACAATAACACATCAAACCCTAACCCCTCTTCCTTGCTGACGTCGCTTACCAAACTTCTCTGGGGACAATCACTTCCGCCGGGCCTCCTAGTTTCCACCGCGCGTGCCACGTGGAATGCCACGTGGCGCCTCATGATGTCACAGCTCGCTCCCTCCGACCCTTCAGGCGGTTACGCCAGGCCGGCCTCCAAGTTCCGCTTACCACAGAAGAACATCTCAAGCCCAACGAGCCTGCACCTTTACGTGGCCCTTCCATGCCCGTGGGCCCACCGGACACTTATAGTCCGGGCCCTCAAGGGCCTTGAGGACGCCGTCCCGGTTTCTGTAGCATCCCCAGGCCAGGACGGGTCGTGGGAGTTCAAACAGGCCAATGGTCCGGGCTTAAGCCCGGGATTGGACAAGGCAAACAGGTGTAGAACGTTGAGGGAAGTTTATGGGATGAGAAAAGGTGGGTATGATGGGAGGGCCACGGTGCCTATGCTGTGGGACAAGGATTCGAAGGAGGTTTTGTGCAATGAGAGTTATGACATAATTGAATTTTTCAATTCCGGGTTGAACGGGTTGGCCCACAACCCGGGTTTGGATCTATCGCCTTCTGAGTTGAAGGGGAAGATTGAGGAATGGTATAGTGTGATATACCCAAATGTGAACAATGGTGTTTACAGATGTGGATTTGCACAGACACAAGAAGCTTATGACAGAGCAGTGAATGAGTTGTTTGGAACATTAGACAAGTTGGAGGATCACTTGACCACTTCCCGCTACTTATGTGGAGAAAAATTGACCCTTGTAGATATATGTCTGTTTACCACTCTAATTCGGTTTGATGTTGCATACAATGTTCTTTTTAAGTGTACCAAGAAGAAGTTATGTGAGTATCCAAATCTACATGCCTACATGCGTGACATTTATCAGATGCCTAAAGTTGCAGAAACCTGCAATTTTTCTGAAATCATGGATGGTTATTACAAAATACTTTTCCCTCTAAATCCAGGGAGCATAAGACCAATCATGCCTTCAACTTCTGAGCATGAAATCCTTTGCAGACCTCATGGTAGGGAGTCTCTATCAGCAGCTTTACCCGTCTTTGTTAAATAG 1239 0.4915 MMPCYAPSFCPYLVTPPSTSVHGGSHHRRPTKRNVTILYPKMSLNNNNNNTSNPNPSSLLTSLTKLLWGQSLPPGLLVSTARATWNATWRLMMSQLAPSDPSGGYARPASKFRLPQKNISSPTSLHLYVALPCPWAHRTLIVRALKGLEDAVPVSVASPGQDGSWEFKQANGPGLSPGLDKANRCRTLREVYGMRKGGYDGRATVPMLWDKDSKEVLCNESYDIIEFFNSGLNGLAHNPGLDLSPSELKGKIEEWYSVIYPNVNNGVYRCGFAQTQEAYDRAVNELFGTLDKLEDHLTTSRYLCGEKLTLVDICLFTTLIRFDVAYNVLFKCTKKKLCEYPNLHAYMRDIYQMPKVAETCNFSEIMDGYYKILFPLNPGSIRPIMPSTSEHEILCRPHGRESLSAALPVFVK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0847 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 218 387 IPR010987 -
Amo12g0847 412 PANTHER GLUTATHIONE S-TRANSFERASE C-TERMINAL DOMAIN-CONTAINING PROTEIN-LIKE 44 406 - -
Amo12g0847 412 Pfam Glutathione S-transferase, N-terminal domain 133 229 IPR004045 -
Amo12g0847 412 CDD GST_C_Omega_like 245 386 - -
Amo12g0847 412 Pfam Glutathione S-transferase, C-terminal domain 276 348 - -
Amo12g0847 412 PANTHER GLUTATHIONYL-HYDROQUINONE REDUCTASE 44 406 IPR016639 GO:0004364
Amo12g0847 412 SUPERFAMILY GST C-terminal domain-like 237 374 IPR036282 -
Amo12g0847 412 SUPERFAMILY Thioredoxin-like 122 230 IPR036249 -
Amo12g0847 412 SFLD Xi.1 95 402 IPR016639 GO:0004364
Amo12g0847 412 Gene3D - 252 409 - -
Amo12g0847 412 SFLD Xi (cytGST) 95 402 - -
Amo12g0847 412 Gene3D Glutaredoxin 90 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0847 Amo-Chr12 18631530 18633309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0847 113 371 Glutathione S-transferase Gene Family AT5G02780 23.396 1.31e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0847 K07393 - gmx:100812499 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0847 12 18631530 18633309 Amo12g0847 12 18631530 18633309 ECH