Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0843 ATGAGGGTTTTCCCCTATTTTTCACTATTTCTATTTGATCTAACAGTTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAAATGGAAAAACCGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAAAAAATGAAAAATTTCAGAGACGAAGCTATTGGATGCTTGAAATGTGA 225 0.3511 MRVFPYFSLFLFDLTVLRYFRKDGHNWRKKKNGKTVKEAHEKLKVGSVDVLHCYYAHGEKNEKFQRRSYWMLEM* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0843 74 SMART CG_1_2 1 73 IPR005559 GO:0003677
Amo12g0843 74 Pfam CG-1 domain 8 73 IPR005559 GO:0003677
Amo12g0843 74 ProSiteProfiles CG-1 DNA-binding domain profile. 1 74 IPR005559 GO:0003677
Amo12g0843 74 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 8 73 - -
Amo12g0843 74 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0843 Amo-Chr12 18513889 18514219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0843 5 73 CAMTA Transcription Factor Family AT5G64220 86.957 6.68e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0843 K21596 - aip:110270662 137.887