Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0842 ATGTATAACTTAGTATTTTGCATCATTTTGCTTGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAAAAAATGAAAAATTTCAGAGACGAAGCTATTGGATGCTTGAAATATGTTTGCATCGATGCAACCTAGCTGAAAATTCAAATTTCAGCTTCAAAGACACATTTGCATCGATGCAAATATTTGCAAACTATCTTGTTCATATTCTTTCATTCTACACATTTTTAAGGTGTTATAATACACAATTTGAGAGAGCAATATCAATTGGTTCAATAGTGCTAAACTTGTAA 303 0.3267 MYNLVFCIILLVGSVDVLHCYYAHGEKNEKFQRRSYWMLEICLHRCNLAENSNFSFKDTFASMQIFANYLVHILSFYTFLRCYNTQFERAISIGSIVLNL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0842 100 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 10 46 - -
Amo12g0842 100 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 10 46 - -
Amo12g0842 100 ProSiteProfiles CG-1 DNA-binding domain profile. 1 60 IPR005559 GO:0003677
Amo12g0842 100 Pfam CG-1 domain 10 40 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0842 Amo-Chr12 18509670 18511914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0842 10 40 CAMTA Transcription Factor Family AT5G64220 83.871 2.71e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0842 K21596 - aip:110270662 67.0106