Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0839 ATGCGTTTGCTCCTTTCATTGTCACACGAGCTCTCTCGGCCGTGCTCTTATTTTAGGAGCTCCCTCCGCCGCCGCTCTCGCACTGCTTCTTCTCTCCTCGCCAGAGTGCCTGATGCGGAGAGCTTCAACAACAGTGTGGCAAAGCAACAGGTTGTACTCGAAACTGTGGCCAGGGTCAAGCCAAAGAAGAACGAGACAAAGGATGAAAAATTGATTTCAGACCTTGTGGTCGCTATAGTTTTGGCAACTTGTGGTGGCGTTGCATTTGCTTTTGTGGGACAACCGGCCTGA 291 0.5155 MRLLLSLSHELSRPCSYFRSSLRRRSRTASSLLARVPDAESFNNSVAKQQVVLETVARVKPKKNETKDEKLISDLVVAIVLATCGGVAFAFVGQPA* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0839 96 PANTHER K(+) EFFLUX ANTIPORTER 6 70 95 - -
Amo12g0839 96 PANTHER K(+) EFFLUX ANTIPORTER 6 36 70 - -
Amo12g0839 96 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 70 95 IPR045158 GO:0015386|GO:0071805|GO:1902600
Amo12g0839 96 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 36 70 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0839 Amo-Chr12 18398421 18400154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0839 35 95 Antiporters AT2G19600 46.667 9.27e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0839 - - gmx:100811030 79.3369