Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0833 ATTCTAGAATTTACTGAAGTAGTTGCAGAGTCACAAAATCCAATCCTTTCCATAATCCCATCCAATCCTGAGGTGGTCGTTTCTAACAATAACATCACCAACAACAGAGCTGGAGGGCCTAAACATTCAGTGGAATCAATTGTTGGTGGAAATGGAAATCTGAGAGGCGATGAACCAGATGATGAAGAAGATAATATTATAACTAGGTTGAAACTTCGAGCATCGACGATGGCATCGGTTGCTGATACCATGAGGATGAACAACAAAAGGAATAAAAATAATCTTTCAAAAATTACTTACTTGACAAAGAGCGAGTCTGAAAACCTCGAAGATGGTTATAAATGGCGCAAGTACGGCAAAAAATCACTCAAAAAGAGCCCTTTCCCAAGCTACTATCGTTGCACTGCAATTGGTTGCAATGCGAAGAAGAGAGTGGAGCGGTACGTGGATGATCCCACCCATGTACTAACCACCTATGTGGGTTTGCACGCTCATGATTTGCCACCAATCCTCCCTCCTCCATCAAGATCTTTCAACCTCTACAATAACTCCACCGTTAGCCCTGATAAAGGAAGCGATGTACAAAAACCTGTACTTTCAGATGCAAGTGCCGGTGCAAGGGAAAGAAAGCATGGCAATAACACTATTACTAATGTTAATGTTAAAACTGACAGTGATAGTTGTGTTAATGACATTGGCACGATTGAGGATACTGGTACCGGATTGCTTGAGGATATTGTTAATTTGTCATCAATAGCACCTCATCATCAACATCATCAACCAACATCTCTATAG 795 0.4101 ILEFTEVVAESQNPILSIIPSNPEVVVSNNNITNNRAGGPKHSVESIVGGNGNLRGDEPDDEEDNIITRLKLRASTMASVADTMRMNNKRNKNNLSKITYLTKSESENLEDGYKWRKYGKKSLKKSPFPSYYRCTAIGCNAKKRVERYVDDPTHVLTTYVGLHAHDLPPILPPPSRSFNLYNNSTVSPDKGSDVQKPVLSDASAGARERKHGNNTITNVNVKTDSDSCVNDIGTIEDTGTGLLEDIVNLSSIAPHHQHHQPTSL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0833 264 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 189 IPR044810 GO:0003700
Amo12g0833 264 SUPERFAMILY WRKY DNA-binding domain 103 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo12g0833 264 Gene3D WRKY domain 93 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo12g0833 264 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 56 189 - -
Amo12g0833 264 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo12g0833 264 SMART WRKY_cls 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo12g0833 264 MobiDBLite consensus disorder prediction 33 61 - -
Amo12g0833 264 Pfam WRKY DNA -binding domain 110 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0833 Amo-Chr12 18044324 18045577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0833 96 168 WRKY Transcription Factor Family AT5G49520 59.459 3.03e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo12g0833 WRKY 9.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0833 - - adu:107473839 442.965