Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0794 GTTTACCCAGGAATTCTGCCCAGATTGCTACCAAATTGGGAGGTTGTTGTTGTTGACAAAAAAATTTCTAAATATCAAGCCGATGAGTATATTCTGACTCTCTCCATCAGTTTTGTCGAAAGGGCTTTTTGTGTGAAACCTGCTCAAGTCGATGTGGTTGACGAGGCCGGAGTTTGTTACACGGTGGATGTTCGCTCCAAATCCAGTTGGCCCCAAGAGTGCTATCTTGGAAAGGGATGGAGGTCTTTTTGTCACCACTATATGCTTCAAATAGGGAGCATAATCAGACTAATGAAAACTATGTACACAACATTAACTGTGGATACTGTTGTTGTGGGTTTGGGTCACAGATTGGTGTTTGGTTTATTCATAGTGAGGTTCGGACCATCCACCGTGTGTGTGTTAGGCCATACT 414 0.4324 VYPGILPRLLPNWEVVVVDKKISKYQADEYILTLSISFVERAFCVKPAQVDVVDEAGVCYTVDVRSKSSWPQECYLGKGWRSFCHHYMLQIGSIIRLMKTMYTTLTVDTVVVGLGHRLVFGLFIVRFGPSTVCVLGHT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0794 138 Pfam B3 DNA binding domain 32 107 IPR003340 GO:0003677
Amo12g0794 138 SUPERFAMILY DNA-binding pseudobarrel domain 20 100 IPR015300 -
Amo12g0794 138 Gene3D - 12 111 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0794 Amo-Chr12 17088913 17089631 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo12g0794 B3 2.5e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0794 - K07058 aip:107608425 137.117