Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0774 AGGCACCCCAACCAGCAAGAAGCTTTATTCATCACTGCATTGGTGATTGCTGAGATACAGAAAGAGAGAGCAAAACACAATACAAGAATGGCGGTAGAAGAAGAAAAGGAAGGTTCTATGGGAATCAGAGTGCATGGAATGCAATTCTCTTACGAATGGCAATCGCCTCTGTTCGTTGATTTCAAGCTCAACGTCTCTCCTGGATCTCGATGCCTTCTCCTTGGTGCCAATGGATCCGGGAAGACTACATTGCTGAAGATTTTAGCTGGAAAGCACATGGTTGGAGGAAGAGATGTTGTGCGGGTGTTGAATGGTTCTGCTTTCCATGACACTCATCTAGTATGTAGTGGTGATCTTGCTTACTTGGGGGGATCATGGAGTAAAACCATTGGTTCTGCTGGAGATGTTCCACTTCAAGGAGACTTTTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCTGACAGGAGAAATAAGTTGATTGAACTGCTTGATATAGATCTTCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTAGAGTGCAAATATGTCTTGGTCTGCTTCATCCATTTAAGGTTCTCTTGCTGGATGAAGTTACCGTTGACTTGGATGTCGTTACCAGGATGGATTTGTTAGAGTTCTTCAAGGAAGAATGTGAACAGAGACAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTGGAGACATGGGCAACTCATTTGGCATACATACAAGCCGGTGAGCTGAGGAAAGCAGAAAAATTATCCGATGTCGACGAGTTGAAGTCTTCAGCCAATCTGCTATCTGTTGTTGAAACTTGGCTCCGTGCCGAAACAAGGAACGAAAAGAAGAAGCCTGTTCAAAATACTGCCCAAACACAAAAGACTTCTGTTGCTAGTTCTCCATTCTTTTCATCAAGGCACATGGCATATTATCGATAG 960 0.4375 RHPNQQEALFITALVIAEIQKERAKHNTRMAVEEEKEGSMGIRVHGMQFSYEWQSPLFVDFKLNVSPGSRCLLLGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTHLVCSGDLAYLGGSWSKTIGSAGDVPLQGDFSAEHMIFGVEGADPDRRNKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFKVLLLDEVTVDLDVVTRMDLLEFFKEECEQRQATIVYATHIFDGLETWATHLAYIQAGELRKAEKLSDVDELKSSANLLSVVETWLRAETRNEKKKPVQNTAQTQKTSVASSPFFSSRHMAYYR* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0774 319 SMART AAA_5 67 254 IPR003593 -
Amo12g0774 319 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 38 319 - -
Amo12g0774 319 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 277 IPR003439 GO:0005524
Amo12g0774 319 Coils Coil 16 36 - -
Amo12g0774 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 264 IPR027417 -
Amo12g0774 319 Pfam ABC transporter 61 204 IPR003439 GO:0005524
Amo12g0774 319 Gene3D - 40 304 IPR027417 -
Amo12g0774 319 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 38 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0774 Amo-Chr12 16638301 16643766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0774 47 231 Calmodulin-binding Proteins AT2G36910 21.717 1.00e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0774 K12608 - gmx:100788503 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0774 12 16638301 16643766 Amo12g0774 12 16638301 16643766 ECH