Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0757 AGGCACCCCAACCAGCAAGAAGCTTCATTCGTCACTGCATTGGTGATTGCTGAGATACAGAAAGAGAGAGCACAACACAATACAGGAATGGCGGTAGAAGAAGAAAAGGAAGGTTCTATGGGAATCAGAGTGCATGGAATGCAATTCTCTTACGAATGGCAATCGCCTCTGTTCGTTGATTTCAAGCTCAACGTCTCTCCTGGATCTCGATGCCTTCTCCTTGGTGCCAATGGATCCGGGAAGACTACATTGCTGAAGATTTTAGCTGGAAAGCACATGGTTGGAGGAAGAGATGTTGTGCGGGTGTTGAATGGTTCTGCTTTCCATGACACTCATCTAGTATGTAGTGGTGATCTTGCTTACTTGGGGGGATCATGGAGTAAAACCATTGGTTCTGCTGGAGATGTTCCACTTCAAGGAGACTTTTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCGGACAGGAGAAATAAGTTGATTGAACTGCTTGATATAGATCTTCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTAGAGTGCAAATATGTCTTGGTCTGCTTCATCCATTTAAGGTTCTCTTGCTGGATGAAGTTACCGTTGACTTGGATGTCGTTACCAGGATGGATTTGTTAGAGTTCTTCAAGGAAGAATGTGAACAGAGACAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTGGAGACATGGGCAACTCATTTGGCATACATACAAGCCGGTGAGCTGAGGAAAGCAGAAAAATTATCCGATGTCGACGAGTTGAAGTCTTCAGCCAATCTGCTATCTGTTGTTGAAACTTGGCTCCGTGCCGAAACAAGGAACGAAAAGAAGAAGCCTGTTCAAAATACTGCCCAAACACAAAAGACTTCTGTTGCTAGTTCTCCATTCTTTTCATCAAGGCACATGGCATATTATCGATAG 960 0.4427 RHPNQQEASFVTALVIAEIQKERAQHNTGMAVEEEKEGSMGIRVHGMQFSYEWQSPLFVDFKLNVSPGSRCLLLGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTHLVCSGDLAYLGGSWSKTIGSAGDVPLQGDFSAEHMIFGVEGADPDRRNKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFKVLLLDEVTVDLDVVTRMDLLEFFKEECEQRQATIVYATHIFDGLETWATHLAYIQAGELRKAEKLSDVDELKSSANLLSVVETWLRAETRNEKKKPVQNTAQTQKTSVASSPFFSSRHMAYYR* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0757 319 SMART AAA_5 67 254 IPR003593 -
Amo12g0757 319 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 38 319 - -
Amo12g0757 319 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 277 IPR003439 GO:0005524
Amo12g0757 319 Pfam ABC transporter 61 204 IPR003439 GO:0005524
Amo12g0757 319 Gene3D - 40 304 IPR027417 -
Amo12g0757 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 264 IPR027417 -
Amo12g0757 319 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 38 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0757 Amo-Chr12 16088540 16092714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0757 47 231 Calmodulin-binding Proteins AT2G36910 21.717 9.57e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0757 K12608 - gmx:100788503 485.723