Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0701 ATGACAAGCCCAAGTGTATCGAAGAATCGCAACGGCCTTGGTTCCATGTTACAAGTGAATTTGCAGCAGGCATATAATGATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCTTCATCTCCACCTCATCATGCTACCATTCCTTGCTACCCTATTACTCCTCTTCCTCACCTCTCATCATCCGGATCTGGGGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCCTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAGGAGACAGCGATTGATCCCAATGACTTAGTACTGATCCAAGAAGGGATTATTGATGCCACCGATGAAGAAGAGAAGCCATTGAGGGAGAGAGTGACAGTAACACCGGATGATGATGATTTACAAGACACAAGGACGAATGAGGATATTTATCATCATCATCAGGAAATAACATCACTACAAGAGGACCCAAATGCATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGACCTATTCGGCCCTCAGAGACTGCAGGTAATAAACTTCCAACAATTTTACATTCACTATCATAATTATTGGTGCTGGATGTATCACGTCATAGAAGAATCCAGAGACTTCACCTTGAAGGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCAGAGACAAAGGGATACGAAAAGCACGTAATTGTTGATTTGTTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGGTGCGCTCTCAACTTTATATATATATATATATATATCTATATATATATATATATATATAATATATATATATATATATATATATATATATATATATGAGTTCTGA 1191 0.4173 MTSPSVSKNRNGLGSMLQVNLQQAYNDDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHHATIPCYPITPLPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHPQSSPYYRGLTDFSLVLHDHPQETAIDPNDLVLIQEGIIDATDEEEKPLRERVTVTPDDDDLQDTRTNEDIYHHHQEITSLQEDPNAYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRDLFGPQRLQVINFQQFYIHYHNYWCWMYHVIEESRDFTLKGEMVDKLQVQIKKSLHHVEINVSETKGYEKHVIVDLFNGTYAKTINNSLPCSPDNCQGALSTLYIYIYISIYIYIYIIYIYIYIYIYIYEF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0701 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 281 IPR027417 -
Amo12g0701 396 PANTHER OS10G0574500 PROTEIN 38 349 - -
Amo12g0701 396 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 38 349 - -
Amo12g0701 396 Gene3D - 209 362 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0701 Amo-Chr12 13929853 13932118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0701 211 269 Core DNA Replication Machinery Family AT5G27740 37.288 1.51e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0701 K10756 - aip:110268739 545.814