Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0671 GTGGTGTTGGCATTTGTTGGGGAGAATAGAGCACTGCAAGGTTACTCATCTGCACTGAGGATTGCTCAACAGCGGCTCCAGAAAGAGCACGATTGTAAACTGTGTGTAGGACAAGTTTTGCTAGATAGACATGATGTTAAGAGTTTGAAGCTAAAATGGTTGAGGCAGCAAATAGGAGTAGTGAGGCAAAAACCGGCTTTGTTTGCGACAACAATTAGAGAAAACATACTCTTAGAAAGATTTGATGCTGACCAAGTTGAGATTGAAGAAGCTGCAAGAGTAGCCAATGCTCATTTTTTCATTATCAAACTTCCAAATATAGAGTTTCAATTTCTATTCCGATTCATTGGAATCAGAATTGTT 363 0.3939 VVLAFVGENRALQGYSSALRIAQQRLQKEHDCKLCVGQVLLDRHDVKSLKLKWLRQQIGVVRQKPALFATTIRENILLERFDADQVEIEEAARVANAHFFIIKLPNIEFQFLFRFIGIRIV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0671 121 Pfam ABC transporter 5 93 IPR003439 GO:0005524
Amo12g0671 121 Gene3D - 36 106 IPR027417 -
Amo12g0671 121 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 36 106 - -
Amo12g0671 121 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 36 106 IPR039421 -
Amo12g0671 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 106 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0671 Amo-Chr12 12754953 12755522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0671 37 106 Calmodulin-binding Proteins AT2G36910 80.000 2.13e-32 117