Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0669 GTCAATGCACCGGCGCTGCCCCCTTCTTCTCTGCCACCACCAATCACGCGAAGGTTAGCCCAGCCACCACTAGAAGCCCCTGTGAAGCTCAGTCAGCCACCACCTCTGCTCGACCGCCCCTTCCCCTGTTCTCAAACTCAGTTGGATCCAGAGCTAGAGTTTGATTGTGAAGTATACCTTGTAGGATTTCTTCCAAATGCTGGTGTAAATTTCCATGTTTTGAGCCCTTTCCTCAAGCATAAACAATATTGCACTGTTTGCTGCGTCATGTTCTTCAAGTATTATATACGAGGAGACATAATCAACATTAAATTAGGAGATATCATTCCGGCCGATGCTTGTCTTCTCGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAATAGGAGAATCTCTTCTAGTGACCAAGAATCCAACTGATGAAATATTTTCTGGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCATGCCTTCTTTGGTAAAGCGGCTCACTTGGTGGACAGCGCTAACCAAGTTGGACACTTCTAG 552 0.4638 VNAPALPPSSLPPPITRRLAQPPLEAPVKLSQPPPLLDRPFPCSQTQLDPELEFDCEVYLVGFLPNAGVNFHVLSPFLKHKQYCTVCCVMFFKYYIRGDIINIKLGDIIPADACLLEGNPLSVDQSALIGESLLVTKNPTDEIFSGSTVKKGEIEAVVIATGVHAFFGKAAHLVDSANQVGHF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0669 183 PANTHER CALCIUM-TRANSPORTING ATPASE 96 183 - -
Amo12g0669 183 Gene3D - 96 161 - -
Amo12g0669 183 Gene3D - 162 176 - -
Amo12g0669 183 SUPERFAMILY Calcium ATPase, transduction domain A 97 174 IPR008250 -
Amo12g0669 183 PANTHER PLASMA MEMBRANE ATPASE 96 183 - -
Amo12g0669 183 Pfam E1-E2 ATPase 98 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0669 Amo-Chr12 12473877 12475674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0669 96 183 Primary Pumps ATPases AT2G18960 80.682 2.37e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0669 K01535 - gmx:100794372 151.369