Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0668 ATGGCTGGGATGGATCTCCTCTGTAGTGACAAAACTGTAACCTTGACATTGAATAAGCTCAGTGTTGATAGAATCTTGATTGAGGGCCTCTATGACGAAAATCAGGTTGCTATAGGTGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGCTCAAGCTGGAATCAGGGGGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGATTGCTCTAACTTACATTGATTCTGATGGAAATTGGCCCCGTGTGAGAAAAGGGGCTCCGGAGAAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCAGGAAGAAGGTTCATGCAGTGATTAATAAGTTTGCTGAGCATGGACTTCGGTATTTAGGTGTTGCAAGACGCATATTGTAA 390 0.441 MAGMDLLCSDKTVTLTLNKLSVDRILIEGLYDENQVAIGAAIVGMLADPKEAQAGIRGVHFLPFNPVDKRIALTYIDSDGNWPRVRKGAPEKIITLCNCKEDVRKKVHAVINKFAEHGLRYLGVARRIL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0668 129 Gene3D - 20 127 IPR023299 GO:0000166
Amo12g0668 129 Gene3D - 5 19 IPR023214 -
Amo12g0668 129 PANTHER CALCIUM-TRANSPORTING ATPASE 1 127 - -
Amo12g0668 129 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 14 128 IPR023299 GO:0000166
Amo12g0668 129 PANTHER PLASMA MEMBRANE ATPASE 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0668 Amo-Chr12 12473197 12473805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0668 1 127 Primary Pumps ATPases AT2G24520 65.972 1.28e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0668 K01535 - gmx:100794372 196.438