Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0622 ATGGCCAATCGCCATCCTTCCGAGGCTCCCGCCGCCGACGACTTCCTCGAGCAAATCCTCGGCCTCCCGAACTTCGCCTCCGCCGACTCTACCCTCGCCGGAGGAACCGGCGCCTCCTCTCTCGCCGCCGCCGCAGCTGCAGCTGCTGCTTCTCCAGCGGCGCCGATGATGCTTCAGCTAAGCTCTGACGACGCCTCCGCCGCGTACCTCGTCGGAGCCACCGCAGGTGGTGGTTTCCACCCGCCTCCGGTGTACGAGCTTGGGCTGAGCCTGGAGCAAGGGAATGGAGGAGGGTTCTTGAAGCCTGAGGATGCTTCTGGAAGTGGAAAACGGTTTCGTGACGACGTTGTTGATGGAAGAGCTAAGAATGTAACAATCATTTTCTCTTCTTTCTCTTAA 399 0.604 MANRHPSEAPAADDFLEQILGLPNFASADSTLAGGTGASSLAAAAAAAAASPAAPMMLQLSSDDASAAYLVGATAGGGFHPPPVYELGLSLEQGNGGGFLKPEDASGSGKRFRDDVVDGRAKNVTIIFSSFS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0622 132 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 124 - -
Amo12g0622 132 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0622 Amo-Chr12 11526997 11528861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0622 84 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.778 3.52e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0622 - - aip:107615047 206.453