Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0571 ATGGAGGAGACTGAAGCTTGTGCAAACCACAGCCCGCTCGTGCTGTTAAAGCAAGGTGCTGAAGCTAGGGTTTTTGAGTCCAATTTTGTGGGGAGGAGGTCTGTCATCAAGGAACGCTTCTCAAAGAAGTATAGGCATCCAACTTTGGATACTAAGCTTACCCTTAGGCGCTTAAATGCTGAGGCTAGGTGCATGACCAAAGCGAGAAAGCTTGGGGTTTGTACTCCTGCACTCTATGCCGTGGATACTGTGTTGAACACTTTAACTTTTGAGTATGTTGAGGGCCCTTCCCTCAAAGAAGTACTTCTTGAATTTGGGTTGAAAGGTGTTGTTGAAGAGCGGCTTGATGATATTGCTTCCCAAGTTGGTGATGCAATTGGTAAATTGCATGATGGTGGCCTTATTCATGGTGACTTAACAACATCAAATATGTTGCTGAAGAGTGGTACCAATCAATTGGTCCTAATTGACTTTGGATTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTCTTCTTTCAATGCATTCGTCATGTGGGAATGTGATGGATCGGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAATAAACTTGCTCAAGTGCGACAAAGAGGGAGAAAGAGGACCATGGTTGGATGA 684 0.4401 MEETEACANHSPLVLLKQGAEARVFESNFVGRRSVIKERFSKKYRHPTLDTKLTLRRLNAEARCMTKARKLGVCTPALYAVDTVLNTLTFEYVEGPSLKEVLLEFGLKGVVEERLDDIASQVGDAIGKLHDGGLIHGDLTTSNMLLKSGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0571 227 Pfam Protein kinase domain 49 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0571 227 ProSiteProfiles Protein kinase domain profile. 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0571 227 ProSitePatterns Tyrosine protein kinases specific active-site signature. 134 146 IPR008266 GO:0004672|GO:0006468
Amo12g0571 227 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 16 221 IPR022495 GO:0004674
Amo12g0571 227 SMART serkin_6 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0571 227 Gene3D Phosphorylase Kinase; domain 1 21 93 - -
Amo12g0571 227 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 3 227 IPR022495 GO:0004674
Amo12g0571 227 Gene3D Transferase(Phosphotransferase) domain 1 106 224 - -
Amo12g0571 227 CDD PKc 18 161 - -
Amo12g0571 227 SUPERFAMILY Protein kinase-like (PK-like) 15 175 IPR011009 -
Amo12g0571 227 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 3 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0571 Amo-Chr12 10315777 10319018 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Os Amo12g0571 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0571 K08851 - jre:109018511 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0571 12 10315777 10319018 Amo12g0571 12 10315777 10319018 ECH