Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0533 ATGATTAAGGAGGTGAGTTTTTCTACAGAAGAAGTTCAATCGGTGGATTTGATTATAGACTCCTACAATTCTCCGTTAGTGGAACAAAATGAAGAAAGAAATCAGCATTTTAAAGATGAAACATTTGAAGTTCAGAATGACCCTATGGAAACTGAAACATCACATTTTTCTGTGAAATTTGATAGTGATAATGAACCATTTGAACATCGAAACCAAGTACTATTACCACCTTTCATGCAATCAGTTGATGAAGTTTGCAGCATAGAGAAGACTGAAGCTTGTCCTGAAGCAGAATTGCTTGAGGAAACTAATTTGCTTTGCACATTGAGAGAGTATTTGACAGAGAGCTTATGTCTGCCTGTTGTGGAAGCACTCCAGGGGACAACAATGCAACAATTTCAAACTCCACAAAATTTCAGGGTGCGGATGCAATTCTCTCCTTTGAAAAGTTCTACTGCAAATCTCCCCAGACCTCTTCTTCAGAATAAAAAGTGGTTGCATCCAAAAAAAGTTCAGGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCCGTGAGAAGAACAAGAGAGGATTAAGGTTGGTGGCAAAGCTTAATTTTTCCCCCTTAATTTTTCCTTTTCTATTTCTTACATGCATTTGA 678 0.385 MIKEVSFSTEEVQSVDLIIDSYNSPLVEQNEERNQHFKDETFEVQNDPMETETSHFSVKFDSDNEPFEHRNQVLLPPFMQSVDEVCSIEKTEACPEAELLEETNLLCTLREYLTESLCLPVVEALQGTTMQQFQTPQNFRVRMQFSPLKSSTANLPRPLLQNKKWLHPKKVQEKFLQERIKVGGKAGALGDSVTVSREKNKRGLRLVAKLNFSPLIFPFLFLTCI* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0533 225 Pfam Ribosomal L22e protein family 172 213 IPR002671 GO:0003735|GO:0005840|GO:0006412
Amo12g0533 225 Gene3D - 161 221 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0533 Amo-Chr12 9344693 9346106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0533 173 201 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 3.22e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0533 K02891 - adu:107467891 248.054