Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0468 ATGGCACATCCTGCAGAAATTTCATCCCCTTCCTTCACCGGTGAATGGGAGTATGATGTTTTCCTCAGTTTTAGAGGGAAAGATACCCGCCACAATTTCACTGGTAATCTCTACCATTCTTTGGATCAAAAGGGAATACACACCTTCATCGATGATGAAGACCTTAGAAAGGGAGAAGAAATTAAGCCATCCCTTCTCAAAGCAATTCAAGAATCTAGGACCGCCATAGTTGTTTTCTCGGAAAACTATGCGTCCTCAACTTACTGTTTGGATGAACTTGTCGCAATTCTTGAGCATTTGAAAGCAGAAGGTCGACTTGTTTGGCCTATCTTTTATGATGTGGATCCATCCGTTGTTCGACATCAGAGGGGTAGTTATGCAGAGGCTTTAGCAAAACATGAAGAAAGGTACCAAGATGACAAGGGCAAAGTGAAAAAATGGAGGAATGCTTTGCTTGAAGCAGCTAATTTGTCTGGTTGGCATTTCATACAGGGGTCTCAAACAGAATATAAGTTTATTACAAATATCATTAGAACTGTCTCCGAAAAGCTCAATCACACTCCTTTACATGTTGCTGACAACCCAGTTGGGCTAGGATCACTGGTGCTTCAAGTGAAATCTATTATGGGAATTAGCTCTAGTGAGAGAGTTAAGATGATCGGAATTTGTGGGACTGGTGGAATAGGTAAAACAACAATTGCACGAGCTGTGTATAACCTGCTCGCTGACCAATTTGATGGTTTGTGTTTTCTTGCGGACATAAGAGAAATGACGATTGATAAGCATGGCCTTGTACAGCTGCAGGAAACACTACTTTCTGAAATACTTGGAGAGAAAGATATTAAGATTGGATGTGTCAATAAAGGGATTCCACTAATAAAAAGGAGGCTCCAAAGAAAGAAGGTCCTATTGGTACTTGATGATGTGGACAATCTTAAACAGTTAAAGGCAATTGCTGGAGGAAATGATTGGTTTGGCTTTGGTAGTCGAATCATTATCACATCTAGAGACAAGCATCTGTTAAGTGCTCATGGGGTGAGTGAGTTTTATGAGGTTAAAGAGTTAAGTAAAAGAGATGCACTTGAATTGTTCAGTTGGAATGCCTTCAAAAGCAACAAAGTTGATCCAGGTTATGCAAAAATTTCAAGCCGTGTCCTGTCGTATGCCGGTGGTCTTCCTTTAGCTCTGCAAGTAATTGGTTCCAACTTGTATAATAGAGGCATTGATGAATGGAAGTCTGCGCTAGATAAATATGAAAGAATTCCTAATAAAGAGGTTAATGAAATACTTAAGCTAAGTTATGATGGTCTGGAGGAAGATGAGAAGAATATTTTCCTTGACATTGCTTGTTTCTTCAACAAATACAAAATGTCCTATGTCAGAGGAATGCTACATGCACATGGTTTCCATCCAGAACATGGCATTCGAGTTTTGGTTGACAAATCTCTTGTGAGTATTGATAGAAATGATTGTCTGAGAATGCATGACTTGATTCAGGATATGGGTAGAGAAATTGTTAGACAGGAATCTCCTTCTCAGCCTGGCAAACGTAGTAGATTGTGGTTTGATGAGGATATTTTTCAAGTTTTGCAAAATGAGACGGGTACCGATAAAGTCGAAGTCATAATTTTGAACTCAAGCAGACAGAAAGAAGTGTGTTGGAATGGGAATGCATTCCAGAAGATGAGGAATCTTAGAGTTCTTATTGTTGGGGATGCATACTTTTCTACAGGTCCCAAACATCTCCCAAATAGTTTACGGGTTTTGGATTGGGTCGGATATCCATCAACATCTTTACCATCTGGTTTTAATCCTACCGAGCTCTCCATACTCAGCATGATTAGTAGCTGCCTTAAATTCGACAAACCACTCAAGGTGTTTTGTTCTTTGAGTTTTATGAATTTTGAAGATTGTAATTTGTTAAGACAAGTACCCAGCCTTTTTGGACTCCCAAACTTAAGGGCATTGTGTCTTGATAATTGCACCAATTTAGTTAAAGTTCATTATTCTGTTGGATTTCTTAAGAAACTCATTTTGTTGAGTGCTCAAGGATGCTCCAAGCTCCAAAGTTTTGTAAGTGCCATTAATTTGCCATCTCTTGAGACTCTAGACCTAAAGTGGTGCACAAGTCTTGAGAGTTTTCCAGAAGTACTAGGACAAATGGAAAACCTCAAAGAGGTTTATTTGGACCACACTGCCATAAAAGAATTTCCATTTTCAATCCACCGTCTGATTGGGCTTGAACGGTTGTTCCTGAGGAGATGCAAAAATCTCAACCAACTTCCAGTCAGCATTAGTTTATTACCCAAACTTGAGGTGTTGATTGATTACAAGGGCAGAGGATATCGATTGTATGAACCACACAAAGCTGAAGAAGCCCTGATGTCAAAAGTGTTCGTATCTCCCTCTTTAGAAGTGGATAAGGGATATATGCTTCCCTTTGCCAAAGCATATTGTATAACGATGATTGACTACAATGTCATCCAAGAATATCCACTATCCGGCATTGTTTTGCCTGAAAAACACGTCCATTTTGGGAGTGGATCATCTGTTTCGTTTTGGTTTCGTGAAAGATTTCCAAAGGTCACAATCTTGCTTATTGCAGAACCTTCTTTATACATTGAAATCATGCATACTTCAGTGTGTGAGTTCAGATACTCGGTGGTCATCAATGGAATCAACCAATTAAATTCTTCATGTGATTACATCATTTGTGAGACGCGGAAATTGTGTCTGACTATTTTTCTGGGAGACCTTCAACGCCTGATTGAGGAGGGTGCTGTCAAAAGAGTGTTTTCCGTTTCCAAGGATGAACAGAATCACGTTGAGGTTTCATGCGAACTAAAATATCACATGCCATATGATCCTAAGCATGTAAGTGAAGGCCAAAACAGAAGCATAGAAGGAACAATAAAGCAAAGCACCGTTCATGGGGACATGCATGATATCCTATTATATCTATCTCCCTACTGCAAGAATAGTTTCCGCTGCTACTACCAAAGCAAAGCACTTCAAAAATACATGAGAAGAAAAGAAAAGCAGGCACAACATATAAGTGGACAACATATCAATAGAAGATTCACGTGGAAGTGGTCAAGCCCACTTGACAAGACTATGCTAGGCGACAAAGACAAAATATGA 3141 0.3948 MAHPAEISSPSFTGEWEYDVFLSFRGKDTRHNFTGNLYHSLDQKGIHTFIDDEDLRKGEEIKPSLLKAIQESRTAIVVFSENYASSTYCLDELVAILEHLKAEGRLVWPIFYDVDPSVVRHQRGSYAEALAKHEERYQDDKGKVKKWRNALLEAANLSGWHFIQGSQTEYKFITNIIRTVSEKLNHTPLHVADNPVGLGSLVLQVKSIMGISSSERVKMIGICGTGGIGKTTIARAVYNLLADQFDGLCFLADIREMTIDKHGLVQLQETLLSEILGEKDIKIGCVNKGIPLIKRRLQRKKVLLVLDDVDNLKQLKAIAGGNDWFGFGSRIIITSRDKHLLSAHGVSEFYEVKELSKRDALELFSWNAFKSNKVDPGYAKISSRVLSYAGGLPLALQVIGSNLYNRGIDEWKSALDKYERIPNKEVNEILKLSYDGLEEDEKNIFLDIACFFNKYKMSYVRGMLHAHGFHPEHGIRVLVDKSLVSIDRNDCLRMHDLIQDMGREIVRQESPSQPGKRSRLWFDEDIFQVLQNETGTDKVEVIILNSSRQKEVCWNGNAFQKMRNLRVLIVGDAYFSTGPKHLPNSLRVLDWVGYPSTSLPSGFNPTELSILSMISSCLKFDKPLKVFCSLSFMNFEDCNLLRQVPSLFGLPNLRALCLDNCTNLVKVHYSVGFLKKLILLSAQGCSKLQSFVSAINLPSLETLDLKWCTSLESFPEVLGQMENLKEVYLDHTAIKEFPFSIHRLIGLERLFLRRCKNLNQLPVSISLLPKLEVLIDYKGRGYRLYEPHKAEEALMSKVFVSPSLEVDKGYMLPFAKAYCITMIDYNVIQEYPLSGIVLPEKHVHFGSGSSVSFWFRERFPKVTILLIAEPSLYIEIMHTSVCEFRYSVVINGINQLNSSCDYIICETRKLCLTIFLGDLQRLIEEGAVKRVFSVSKDEQNHVEVSCELKYHMPYDPKHVSEGQNRSIEGTIKQSTVHGDMHDILLYLSPYCKNSFRCYYQSKALQKYMRRKEKQAQHISGQHINRRFTWKWSSPLDKTMLGDKDKI* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0468 1046 Gene3D - 354 438 IPR042197 -
Amo12g0468 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 448 IPR027417 -
Amo12g0468 1046 Coils Coil 130 150 - -
Amo12g0468 1046 Pfam NB-ARC domain 215 434 IPR002182 GO:0043531
Amo12g0468 1046 Pfam TIR domain 18 189 IPR000157 GO:0007165
Amo12g0468 1046 Gene3D - 14 182 IPR035897 -
Amo12g0468 1046 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Amo12g0468 1046 Gene3D - 183 347 IPR027417 -
Amo12g0468 1046 SUPERFAMILY L domain-like 508 775 - -
Amo12g0468 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Amo12g0468 1046 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Amo12g0468 1046 PRINTS Disease resistance protein signature 389 403 - -
Amo12g0468 1046 PRINTS Disease resistance protein signature 695 711 - -
Amo12g0468 1046 PRINTS Disease resistance protein signature 219 234 - -
Amo12g0468 1046 PRINTS Disease resistance protein signature 296 310 - -
Amo12g0468 1046 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 719 - -
Amo12g0468 1046 SMART AAA_5 216 355 IPR003593 -
Amo12g0468 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 719 IPR044974 GO:0006952
Amo12g0468 1046 SMART till_3 17 157 IPR000157 GO:0007165
Amo12g0468 1046 Gene3D Ribonuclease Inhibitor 695 775 IPR032675 -
Amo12g0468 1046 Gene3D Ribonuclease Inhibitor 538 694 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0468 Amo-Chr12 7603059 7607751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0468 10 774 WRKY Transcription Factor Family AT4G12020 34.474 2.25e-104 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0468 - - ahf:112802989 1075.08