Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo12g0435 | ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATAAAGGCAATAATAGAGGAGGAGCTTGTGAGAGGGCGTGAATTTGCCGATCAGTTAAGACAACTTATCGTCATCAATAAAGAAGATGATGACTCAGCTGATCATCAATGGCTTCTCAGTAACGTCCTCACCTCCTTCGCCAACACCCTCTCTCTCTTGAACAAATATCCCATACATCCAAATCCAATTCATCTTCACCAATCTTCTGCTTCTTCCTCTTCTTCCCATAATAGTGATCTTCTCATCATGCAAATGCAGCACCCGCAGATCCACCCTTGCTTGCTTACAGATGACAACCACATTTGCAAGACCCCGCCGCCGCCGGACACAAGAGGCTCTTACCGGAGAAAAAGAAACATAGAGACATGGAAGAAGGAGACGGAGAATGAAAGAGAGGAGGATGGGCATCAATGGAGGAAGTATGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCCGAGCAACCAAGCAAGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGCCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATTACCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTCTCATCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTGCGATGATGATAGTGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACTCACCCCGTTTTGGATGATTCGTCAAGGCATCATGTGGTTCCTATATTATCATCGTCAGAAAATAATAATATTTGCTGGGATGATATGATGATGATGGCTGCCATGTCTCAAGTGTTATACGATTCTGTTGATGAGGGATGA | 996 | 0.4548 | MKMIMEDDDIVSREDGIKAIIEEELVRGREFADQLRQLIVINKEDDDSADHQWLLSNVLTSFANTLSLLNKYPIHPNPIHLHQSSASSSSSHNSDLLIMQMQHPQIHPCLLTDDNHICKTPPPPDTRGSYRRKRNIETWKKETENEREEDGHQWRKYGQKAIQNEKYTRNYFRCTHKYEQGCRATKQVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDYPTSSSSSIFLSFDNSFPNPPTNPFLSSSSSSLFPSTAPPLPAMMIVEEDRQVLPSTTSTHPVLDDSSRHHVVPILSSSENNNICWDDMMMMAAMSQVLYDSVDEG* | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo12g0435 | 331 | SMART | WRKY_cls | 148 | 210 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo12g0435 | 331 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 22 | 292 | IPR044810 | GO:0003700 | |
Amo12g0435 | 331 | Gene3D | WRKY domain | 134 | 210 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo12g0435 | 331 | ProSiteProfiles | WRKY domain profile. | 143 | 206 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo12g0435 | 331 | Pfam | WRKY DNA -binding domain | 149 | 208 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo12g0435 | 331 | PANTHER | WRKY TRANSCRIPTION FACTOR 70-RELATED | 22 | 292 | - | - | |
Amo12g0435 | 331 | SUPERFAMILY | WRKY DNA-binding domain | 145 | 209 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo12g0435 | Amo-Chr12 | 7116970 | 7118519 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo12g0435 | 18 | 213 | WRKY Transcription Factor Family | AT3G56400 | 36.139 | 8.50e-30 | 113 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo12g0435 | WRKY | 1e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo12g0435 | - | - | adu:107473290 | 563.148 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo14g3058 | 14 | 129301412 | 129304291 | Amo12g0435 | 12 | 7116970 | 7118519 | PCT | |
Amo04g2073 | 04 | 90535848 | 90538475 | Amo12g0435 | 12 | 7116970 | 7118519 | PCT | |
Amo12g0435 | 12 | 7116970 | 7118519 | Amo14g3058 | 14 | 129301412 | 129304291 | PCT | |
Amo12g0435 | 12 | 7116970 | 7118519 | Amo04g2073 | 04 | 90535848 | 90538475 | PCT |