Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0429 GCAGACATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTATGAATCTCGCGAACTATGTCTGCAGCAATATAGTATGCTGAGAGCTTCAGTTGCAACTTGTGAATATCTAGATGAGGATTCATTGACCAAGTGCATTGACCTAATGCAGGAGATGGTTATGTGGATGGAAGCGAACAAGTCAACCATTGATACAAGCTTTCTAAGCATTGAGACTCCGCAAGTGCTTAAAGAACAAGCTACAAAGATAATCTTCAATGCTCACAATGACATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTCACGAACTATGTCCGCAGCAATATTCTATGCTGAGAACTTCAATTGCAACTTGTGAGTATCTAGATGAGGTGAAACTCAAAGATCCATCACTGAAGCAAGTGCTTAAAGAGCAAGCTACAAAGATAATCTTCAATGCTCACGATGACATTAAACTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTTGTGAACTATGTTTGCAACAATATACTATGCTGAGAGCTTCAATTGCAACTTATTCATTGACCAAGTGCATTGACCTAATGCAAGAGATGGCTATGTGGACGGAAGCGAATGAGTCAACCATTGATACAAGCTTTCTAAGCATTGAAACTCCGGATTCAATGACCAAGTGCATTGACTTAATGCAAAAGATGGTTATGTGGATGGAAGCGAACGAGTCAACCATTGATACAAGCTTTCTAAGCACTAAACCTTCGGTGAGCGTGCTGGAGAGAAGCATTAAGCGGCGAAGAATCTAA 852 0.3955 ADIKLLEYKPSTIAASALIYESRELCLQQYSMLRASVATCEYLDEDSLTKCIDLMQEMVMWMEANKSTIDTSFLSIETPQVLKEQATKIIFNAHNDIKLLEYKPSTIAASALISASHELCPQQYSMLRTSIATCEYLDEVKLKDPSLKQVLKEQATKIIFNAHDDIKLLEYKPSTIAASALISASCELCLQQYTMLRASIATYSLTKCIDLMQEMAMWTEANESTIDTSFLSIETPDSMTKCIDLMQKMVMWMEANESTIDTSFLSTKPSVSVLERSIKRRRI* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0429 283 Gene3D - 145 259 - -
Amo12g0429 283 PANTHER CYCLINS 79 142 IPR039361 -
Amo12g0429 283 SUPERFAMILY Cyclin-like 151 237 IPR036915 -
Amo12g0429 283 Pfam Cyclin, C-terminal domain 2 69 IPR004367 -
Amo12g0429 283 PANTHER CYCLINS 141 239 IPR039361 -
Amo12g0429 283 PANTHER CYCLINS 3 79 IPR039361 -
Amo12g0429 283 SUPERFAMILY Cyclin-like 72 124 IPR036915 -
Amo12g0429 283 Gene3D - 67 144 - -
Amo12g0429 283 Gene3D - 1 66 - -
Amo12g0429 283 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 79 142 - -
Amo12g0429 283 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 3 79 - -
Amo12g0429 283 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 141 239 - -
Amo12g0429 283 SUPERFAMILY Cyclin-like 2 79 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0429 Amo-Chr12 7033789 7036923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0429 2 72 Core Cell Cycle Gene Families AT4G03270 35.211 1.30e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0429 K18812 - gmx:100799985 114.005