Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0421 ATGGGAAAAGAAGATCAAAAGATGGGGAGTAGGGTAGATAATAAGTACCTGCCGGTGGTGGCAATGGTGCTGCTACAGGTGATATATGCAGGTATTGCCATTGGAACAAGGACTGTCTTAGTAGAGGGAATGAGCCCAAGGGTCTTTGTTGTCTACCGCCAACTTATGGCAACTCTTGTCATTGTTCCCGTCGCTTATTTCTCTGGGAGAAACTCTGGCTCGTGGTCCTTAAGTTTTAGGAGTTTTTGTCTCATATTCCTTGCTTCACTAATTGGTGTGACGTTGAATCAGAATCTATTGTATGAGGGTCTATATCTGGTTTCCTCTTCAGTTGCAAGTGCAATGGCCAATCTTCTCCCAGCTCTCACTTTTCTTATAGCAGCTCTTCTTCGAATGGAGAGAGTAAATATTGGAAGCTGGAGAGGCATAGCAAAAATAGTAGGGACAGTGGCATGTGTAAGTGGAGCAGTGTCCATGGCATTGTTGAAGGGTCCAAAGCTACTCAATAATTCACAAAAGCTTCCACCATCAAATTCACTTCTCATAGGTTTAGGTGGTCCTGACAACAATTGGTTTCTGGGTTGTCTCTTTCTCTTTGGAAGCAGTTTTTGCTGGTCACTTTGGCTGATTTTGCAGGTTCCAGCATCTGCAAGCCACCCGAATCACTTGTCTCTATCAGCATGGATGTGTTTGATGGCAGCATTACAATCAGGAGCAGTCACACTATTCCTGGAGCCACACCCTGCAGCTTGGAAGTTTCACACTCTTCTTGAATTTGCTTCCACTGTATATGCAGGAGTTATGGGATCTGCAGTATCATTCTTTGTGCAAGCATGGTGCATCTCAAGAAGAGGTCCTCTCTTCTCTGCAATGTTCACTCCCTTGTACACTGTCATTACCACCATATTCGCAGCCATAATGCTTCACGAGACCCTATACACTGGAAGCTTGATAGGCGCAATTGGAGTTATTATTGGCTTGTATATTGTGCTGTGGGGTAAGGCTGAAGAAGTAGCTGAAAATGATGATAATGTGACGACCGATCCAATAACACCAGCGGAAGAGGAAGTGAAGATCCACATAATAAAAAATATTAATAATAATAATAATAATATTGAATCAACTGATTTTGAAGAACCCCTTCTCTCCTCCAACTCCCCTTCACATTCTTGA 1173 0.4314 MGKEDQKMGSRVDNKYLPVVAMVLLQVIYAGIAIGTRTVLVEGMSPRVFVVYRQLMATLVIVPVAYFSGRNSGSWSLSFRSFCLIFLASLIGVTLNQNLLYEGLYLVSSSVASAMANLLPALTFLIAALLRMERVNIGSWRGIAKIVGTVACVSGAVSMALLKGPKLLNNSQKLPPSNSLLIGLGGPDNNWFLGCLFLFGSSFCWSLWLILQVPASASHPNHLSLSAWMCLMAALQSGAVTLFLEPHPAAWKFHTLLEFASTVYAGVMGSAVSFFVQAWCISRRGPLFSAMFTPLYTVITTIFAAIMLHETLYTGSLIGAIGVIIGLYIVLWGKAEEVAENDDNVTTDPITPAEEEVKIHIIKNINNNNNNIESTDFEEPLLSSNSPSHS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0421 390 PANTHER WAT1-RELATED PROTEIN 18 363 - -
Amo12g0421 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 334 - -
Amo12g0421 390 PANTHER WAT1-RELATED PROTEIN 18 363 IPR030184 GO:0016021|GO:0022857
Amo12g0421 390 Pfam EamA-like transporter family 20 153 IPR000620 GO:0016020|GO:0016021
Amo12g0421 390 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Amo12g0421 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0421 Amo-Chr12 6906446 6911088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0421 14 390 Nodulin-like Gene Family AT4G30420 53.034 5.91e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0421 - - adu:107473294 714.146