Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0390 AGATTTCTCCTTCTATCAGCATCATCCGAGAAGCTCGTCGTCGGTCTCCTCCGGTCTCCGATCTCGCGTGCCTTCCTTGCCGTCGTCGTCACTAGCGGCAGTAGCCGGAACTTTCCGACCTGGACGTCGTCGCCGCTCCGTGTCTTGTCACTGCCTCGCAGTCAGTCTCGCGCGCCGTCATTGCGCCCGTCGACGCCGACACAGAAGCAGCAGGTCCCCGACTTCCTCCTCGCCTTCAGCAACTCCTCGGCTTCCTTCGCACAACCTGGTCCCAATTTGGTCTGGGATATGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGACACCGACTCGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCCGATGATGGTCAAATGGCCGAGCCTTCTTTGCACAGAAACTTCACTGTATGA 585 0.5316 RFLLLSASSEKLVVGLLRSPISRAFLAVVVTSGSSRNFPTWTSSPLRVLSLPRSQSRAPSLRPSTPTQKQQVPDFLLAFSNSSASFAQPGPNLVWDMLSNEEVVEIVSTTPTRASAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQMAEPSLHRNFTV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0390 194 Gene3D - 93 159 IPR036457 -
Amo12g0390 194 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 93 193 - -
Amo12g0390 194 PANTHER ALPHABET, ISOFORM E-RELATED 93 193 - -
Amo12g0390 194 MobiDBLite consensus disorder prediction 168 194 - -
Amo12g0390 194 SUPERFAMILY PP2C-like 94 149 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0390 Amo-Chr12 6427857 6429387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0390 72 194 PP2C-type Phosphatase Gene Family AT1G03590 60.484 5.32e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0390 - - aip:107612736 201.83