Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0383 ATGGTTCCACTCTCACTCACACACTTTACAGCCCCCCTCCCTTGTGCTCTTCATGGAGCTAAACAATTAACTCTCCAATGCACAAATCATGAGCAGGACATATTACAGGGTAGTTGCATATCTGAGAAAATAACATTAAGGAGGACACTTGTTCTTTCTGCTTTTGTATCAACTTGTGTTTTTCCAACCTTATCTTCTTATGCCAAGACTAAGACTAAGAATCCATATGATGAAAAACGCCTCCTACAACAAAATAAACGGATACAGCAAGAAAACAATGCACCTGAGGATTTCCCAAATTTCATCAGAGAAGGTTTTGAAGTTAAAGTAGTAGCACCGGATAACTATACCAAGAGTGATTCAGGGCTCATATACCGGGATTTCGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACGTTTCACTATGTCGGCTATAACGAATCTGGCCGTCGTATAGACAGCACTTACTTACAGGGTTCTCCTGCCAGAATCCGTATGGGGACTAAAGCATTGGTTCCTGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATTCCCCCTGAACTTGGGCCACCAGTTGGACCTTCAACCTTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTATTAAGCATACAGAACTGTGAAAGGAGGACCATAGCTTTCTACTCTGATGTTGTATGCAACTGA 729 0.4143 MVPLSLTHFTAPLPCALHGAKQLTLQCTNHEQDILQGSCISEKITLRRTLVLSAFVSTCVFPTLSSYAKTKTKNPYDEKRLLQQNKRIQQENNAPEDFPNFIREGFEVKVVAPDNYTKSDSGLIYRDFEVGKGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVVCN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0383 242 Gene3D - 73 234 IPR046357 GO:0003755
Amo12g0383 242 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 136 222 IPR001179 GO:0003755
Amo12g0383 242 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 139 226 IPR001179 GO:0003755
Amo12g0383 242 SUPERFAMILY FKBP-like 61 226 - -
Amo12g0383 242 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 29 242 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0383 Amo-Chr12 6326248 6329056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0383 129 228 Calmodulin-binding Proteins AT5G48570 32.353 6.79e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0383 - - gmx:100305486 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0383 12 6326248 6329056 Amo12g0383 12 6326248 6329056 ECH
Amo12g0383 12 6326248 6329056 Amo02g2004 02 65874664 65879575 hybridization