Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0373 AGCGAGTCAGAGGCTCAGAGTCCCTATCCACCAATGGGCGTGAATTCCACCACCACCGTCAACAAAATCCAATCGGAATTACCGATGTCAGTGGTATCTTCGCCGTTGGAGATCCACAACGTGCGGTTGCCGCCGCGGCGAAGCACCTCACAGAAGCTGAGGCAGAGGCTCTCAGACATATTCTTCCCAGACGATCCACTTCACCGGTTCAAGAACCAACCGTCATGGCTGGTGAAGCTCATGCTCGGTGTTCAGTGCATGTTCCCTATCTTCCAGTGGGGCCCAACCTATAACCTTTCCCTTTTTCGTTCTGACGTCATCTCTGGCCTCACCATTGCTAGTCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGTGTTGGTCCAGTCTCAATTGCATCTTTGGTGATGGGATCAATGTTAAGTGAAACAGTTTCTTATACACAAGATCCAATTCTTTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTAGGATTCATGGCTGGTGCAGCCATAATTGTATCTTTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCGGTTTTCAAACAAAAAGAGGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACAATTTTAGTCTTTCTCCTAAGAAACAAGGCTCATGGAATTGCAATTATTGGTGAATTGCCAAAAGGCCTTAATCCACCATCATCAAACATGTTATTCTTTAGTGGCCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTTACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCAATTGGTATCATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTTGTGACTCTTCTGTTTCTAATGCCACTATTCTATTACACGCCAAACGTCGTCTTAGCAGCGATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTTCATATAAGCTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCAATATCAGTGTTCAAGATATTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCCAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGGTTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTGATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 1995 0.4296 SESEAQSPYPPMGVNSTTTVNKIQSELPMSVVSSPLEIHNVRLPPRRSTSQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCMFPIFQWGPTYNLSLFRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIIPVLASVFKQKEEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQASYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0373 664 Gene3D STAS domain 513 658 IPR036513 -
Amo12g0373 664 TIGRFAM sulP: sulfate permease 89 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo12g0373 664 PANTHER SLC26A/SULP TRANSPORTER-RELATED 28 664 - -
Amo12g0373 664 SUPERFAMILY SpoIIaa-like 538 655 IPR036513 -
Amo12g0373 664 PANTHER SULFATE TRANSPORTER 28 664 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo12g0373 664 Pfam Sulfate permease family 102 482 IPR011547 GO:0016021
Amo12g0373 664 Pfam STAS domain 534 652 IPR002645 -
Amo12g0373 664 ProSitePatterns SLC26A transporters signature. 131 152 IPR018045 GO:0008271|GO:0008272
Amo12g0373 664 ProSiteProfiles STAS domain profile. 533 656 IPR002645 -
Amo12g0373 664 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0373 Amo-Chr12 6190011 6195276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0373 36 664 Inorganic Solute Cotransporters AT3G15990 77.338 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0373 K17471 - gmx:100780331 1114.37