Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0323 ATGGCGGACCCAAAGATTTCGGCGTACTACCAAACACGTATGGCGCACTTCGGTGCAGTCACCAACGACTGGCTCGCCCAGGCCCAGTCCGCCTCCGRCATCACCACCACCCCACCACCACCATCTCCGCCACCAACCGCCGCAACTCTCTCCGATCCCAGCCACCAGAAACCCTCGTTCTCGGTCATCGACGAATTCAACCGGTGGCGGAAACAGCCCGACCTGGCGGAGGCCGTCGCCGCAATCCGCGCCCTCGCCGCAGTCATAAGGTCSAGCATGGCCACCACCATGATGCAGCTCGAGATCGAGCTCAAATCTGCTTCCGATTCGCTCAAGTCATGGGATACAACCTCTATATCATTGACAGCAGCATGTGATCTGTTTATGCGGTATGCTCGCAAAGTCATTGCAATGCTSAGTCAAGATTTTATATTCAATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTGGAAGTTCTGAAATTGGCAGCACAAAATAAAAAATTGTTTCGGGTTTTGTGCACAGAGGGGAGACCAGACCGAACAGGGTTACGGTTGTCCAATGAATTAGCCAAGCTGGATGTTCCTGTGAAACTTGTAATAGACTCTGCGGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTAGGGGCAGATGGAGTTGTCGAAAGRGGCGGTATAATCAACATGATGGGCACATACCAAATTGCAATGGTCGCAAAGAGCATGAGCAAGCCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTCGCCTTTACCCGRTGGATCAAAAGGATTTGGCACCTGCATTGCGCCCAGTTGACTTCGGTGTACCAATTCCATCAAAGGTAGAGGTTGAATGTTCTGCCAGGGATTACACTCCTCCTCAATATCTGACTCTGCTCTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTTATCCAGCTATACTTATAG 984 0.4949 MADPKISAYYQTRMAHFGAVTNDWLAQAQSASXITTTPPPPSPPPTAATLSDPSHQKPSFSVIDEFNRWRKQPDLAEAVAAIRALAAVIRSSMATTMMQLEIELKSASDSLKSWDTTSISLTAACDLFMRYARKVIAMLSQDFIFNGCTILVHGFSRVVLEVLKLAAQNKKLFRVLCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVERGGIINMMGTYQIAMVAKSMSKPVYVAAESYKFARLYPXDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0323 327 Gene3D - 146 327 IPR042529 -
Amo12g0323 327 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 132 - -
Amo12g0323 327 MobiDBLite consensus disorder prediction 30 58 - -
Amo12g0323 327 SUPERFAMILY NagB/RpiA/CoA transferase-like 75 326 IPR037171 -
Amo12g0323 327 Pfam Initiation factor 2 subunit family 132 315 IPR000649 GO:0044237
Amo12g0323 327 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 132 327 - -
Amo12g0323 327 Gene3D - 59 145 IPR042528 -
Amo12g0323 327 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 132 - -
Amo12g0323 327 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 132 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0323 Amo-Chr12 5419325 5421711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0323 6 327 Eukaryotic Initiation Factors Gene Family AT1G53880 72.034 5.00e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0323 K03239 - qsu:112033330 489.96