Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0314 ATGAAAACGAGTCCCGACCGTACAATTAAGCTCCTCTGCAACTATGGCGGCAAGATCCTCCCACGTGCTACCGACGACTTGTTGGTAAAGCTAGGAGAGTTGTGCGGTTCGTCTGTGACGTTACGGTGTCAATTGCAGAACGGAGACTTAGAAACCTTGATCTCCGTCACCAACGACGAAGAAGCTGACTACATATCGAAGATATGA 207 0.4879 MKTSPDRTIKLLCNYGGKILPRATDDLLVKLGELCGSSVTLRCQLQNGDLETLISVTNDEEADYISKI* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0314 68 PANTHER OS05G0427100 PROTEIN-RELATED 5 28 - -
Amo12g0314 68 PANTHER PB1 DOMAIN PROTEIN 27 65 - -
Amo12g0314 68 PANTHER OS05G0427100 PROTEIN-RELATED 27 65 - -
Amo12g0314 68 PANTHER PB1 DOMAIN PROTEIN 5 28 - -
Amo12g0314 68 SUPERFAMILY CAD & PB1 domains 24 63 - -
Amo12g0314 68 Pfam PB1 domain 25 61 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0314 Amo-Chr12 5247200 5247566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0314 9 63 MAP Kinase Kinase Kinase AT3G46920 29.870 8.44e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0314 - - aip:107611558 99.3673