Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0282 ATGATGCATATTATTATTGGTTTAGAACTTCTTGTGTTCTTACCTTTTTCTTGTTCTCTTCAACCACCTAATTTGCTTCCAAATCCTTGCAATGAAACTTGTGGAAAACTCCATGTTCCTTTCCCATTCTTTGTCAACTCTTCTTGTGCCTCAATCTCAACTTCTTTCAACCTTTCTTGTTCAAACTCCTCTAACCTTTTCCTCAAAATTGATTCACAAAGTTACAAGGTTTTAGAGTTCTTCAATGATGGCTTGTTGGTGGACTTTCCAGGCGCATCGTCGTCTTCGACTTGCCGAATGTACAATGACTTGAACTCATTTGGGAAAAGTTTTGAAGGAAAAGATGAAGATCAGTATGGAATCTCATTGGACAATGTTGTTGGACTCTATGACTGTGATGACTCCTCAGTATGCAAACCAGATTGTGAAACAATTGAGCTTCCAGGGTGTGATGGAAGTGGCAACAACCTTGGATGCTGTTATCCACTGAGTGATCATAGCATATGGCACAGTGGTGAAGGGTTCTCAGTGTTCTCTGAATTTGGATGCAGAGGGTTCTCAAGTTGGGCTGTTCTTAGAGGATCTAATTCAGGAAAACATGGGGTGAAGTTGGAATGGGGTGTTCCTTTGAAGAAGAATTCATCATCAATGGAGAAAGTTTGTGATTTGAATGCAGAAATGGTGAATGCTACTTCAGTTCAAGGTGCAGTTAGGTGTGTTTGTCAAGATGGATTTCTTGGTGATGGTTTTCTTAATGGATCAGGATGCTTGCAATCTTGTATAAAGAATGGACAGGAAGCATATGGAGACAACTGTTACATCAAAAAACATGATCAAAGGGAAATGCTCATCATTGTAGGAATCTTGGGTCCATTTCTCATTGTTGCTTCATTGATTGCACTATTTTATCTTCTCAAAAAACCAGCAACAAAGCCAGGAATGTTTGACACAGAGCAGGCCTATTACCACAGCATTTCGTTCCGAAAACCGAATCGAACTCGTCTATTCAGCCACCATGATCTAGACAAAGCCACCAAAGGTTTTGAAGAAGGACAGAAGCTTATGAGTGGACTAGCCGGGTCGATTTTTGCCGGAGTTCTCGGCGACGGATCCCACATAGCAGTTCAGAAGCTAAAATGTGAGAATGAGAAGGACATAATCCAACTTGTATCACAAATTGAGATTCTATCAAACATTGTGCATAGGAACATGGCTTGTGTTCTTGGATGTTGCATTGAATCTAGTTACACTCCTCTAGTGGTTTATGAGTACCCTGCTAATGGAACATTAGAGGAGCATTTGAATCATGAATTCAAAGGAAATAATGGAATTGGTTTGGATTGGTATAGAAGATTGATCATAGCTACTGAAACAGCTTACATTCTTGCATTCTTGCACTATGAGAATTCCCCTCCAATTTTCCACAACAATCTAAAATCTGGCTGCATTTTCTTGGATGATGATCTCTCAGTCAAGATCGCCGGCTTCGGCCTACTCAATTCTAAATTCAAGTATGAATCTCATCACTTTTGCAAGAATGATGTCTATGACATGGGATTGCTTCTACTTGAGATCATCTCTGGCTCAAACTCGACTCACCAGAAGTCGGCTTTGGAGAAAATAAGGGATGGGAAGCTAGAAGAGATTGTTGATCCTCTCCTTTCGTACCACGAGATGGCGCAGCTCCGGCGAGATCAGGTGCAGATTGTGGCAGACCTTGCAACAAGGTGTATGCTATTTGGTGGAGATGGAAAGATTGGAATGGTTGATGTTGTAAGAGAATTGGTGCACATAACAAAACAGAGTGGTGATGCTGCCAATTTGGATTTCTTGGAGGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATTTCAATGTCTCCTGATTCTATCATTATTCATTGA 1905 0.4052 MMHIIIGLELLVFLPFSCSLQPPNLLPNPCNETCGKLHVPFPFFVNSSCASISTSFNLSCSNSSNLFLKIDSQSYKVLEFFNDGLLVDFPGASSSSTCRMYNDLNSFGKSFEGKDEDQYGISLDNVVGLYDCDDSSVCKPDCETIELPGCDGSGNNLGCCYPLSDHSIWHSGEGFSVFSEFGCRGFSSWAVLRGSNSGKHGVKLEWGVPLKKNSSSMEKVCDLNAEMVNATSVQGAVRCVCQDGFLGDGFLNGSGCLQSCIKNGQEAYGDNCYIKKHDQREMLIIVGILGPFLIVASLIALFYLLKKPATKPGMFDTEQAYYHSISFRKPNRTRLFSHHDLDKATKGFEEGQKLMSGLAGSIFAGVLGDGSHIAVQKLKCENEKDIIQLVSQIEILSNIVHRNMACVLGCCIESSYTPLVVYEYPANGTLEEHLNHEFKGNNGIGLDWYRRLIIATETAYILAFLHYENSPPIFHNNLKSGCIFLDDDLSVKIAGFGLLNSKFKYESHHFCKNDVYDMGLLLLEIISGSNSTHQKSALEKIRDGKLEEIVDPLLSYHEMAQLRRDQVQIVADLATRCMLFGGDGKIGMVDVVRELVHITKQSGDAANLDFLEETFSNSSLLQMISMSPDSIIIH* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0282 634 Pfam Wall-associated receptor kinase galacturonan-binding 30 80 IPR025287 GO:0030247
Amo12g0282 634 Pfam Protein tyrosine and serine/threonine kinase 350 503 IPR001245 GO:0004672|GO:0006468
Amo12g0282 634 Gene3D Transferase(Phosphotransferase) domain 1 506 600 - -
Amo12g0282 634 SUPERFAMILY Protein kinase-like (PK-like) 327 595 IPR011009 -
Amo12g0282 634 Gene3D Transferase(Phosphotransferase) domain 1 426 505 - -
Amo12g0282 634 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 629 IPR045274 GO:0007166
Amo12g0282 634 Gene3D Phosphorylase Kinase; domain 1 320 424 - -
Amo12g0282 634 PANTHER OS10G0351500 PROTEIN 39 629 - -
Amo12g0282 634 ProSiteProfiles Protein kinase domain profile. 348 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0282 Amo-Chr12 4583307 4586243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0282 29 598 Receptor kinase-like Gene Family AT2G23450 29.194 5.46e-57 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Amo12g0282 PK_Tyr_Ser-Thr 2.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0282 - - gmx:100779880 831.247