Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0268 ATGATCACTTCCAAATATCCAAATATCAATGCTATTAACTTTGACTTGCCTCATGTAATTCAACATGCCCTCACCTATCCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGCATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTAGACATAATGGTTCCGGTTTTGCCGGGGAATACAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACGTGACTTCATTCATTTGGCCACTCTTTCTGGATTTTCTTCCATCAAATTTGTGTGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 444 0.4054 MITSKYPNINAINFDLPHVIQHALTYPGVKHVGGDMFESVPNGDAIFMKCILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDIMVPVLPGNTTAAKVAFKADLLMMTQNIGGKERTKRDFIHLATLSGFSSIKFVCSVSGYWVMEFYK* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0268 147 PANTHER O-METHYLTRANSFERASE 1 147 IPR016461 GO:0008168
Amo12g0268 147 Gene3D Vaccinia Virus protein VP39 1 137 IPR029063 -
Amo12g0268 147 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 147 IPR016461 GO:0008168
Amo12g0268 147 Pfam O-methyltransferase domain 2 129 IPR001077 GO:0008171
Amo12g0268 147 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 147 - -
Amo12g0268 147 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 146 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0268 Amo-Chr12 4292060 4293648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0268 1 147 Monolignol Biosynthesis Gene Families AT5G54160 55.782 2.32e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0268 K13066 - aip:107624476 307.76