Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0266 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAATAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGACTTGGGGRTTTTAGTGGCGYTTCCAATGGCTGTTAAGACTGCATTYGAGCTTGGAATCTTCGACATAATRGCCAAAGGTGGTGAACATGCAAAGYTCTCATCTGAAGACATTGCATCACAGATTGGTAGCATAAACCCTAATGCACCATCGATGGTGGATCGCCTTCTTAGGCTCCTTGCAAGTCATTCTTTGTTGTCTTGTTCATCACTTCCTCAAGTCACCAAAGATGAAAATGATCAAGAACATGAGCTTATTGCATCTCCTCAGAAGATTGTGTATAGTCTTACAGCTGCTGCTTCCAAATATTTTGTGAGTGATGATGATGGTGTCAATTTTGGACACAGTTTGAGCTTGATTCTGGATAAGGTTTTCTTGGAAAGCTGGTCAGTGAGTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTCAGGGCTAATGGGATGCATGCATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTGTTCAACAAAGCTATGATAAGCCACACAACCATAGTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTCAACAACATTAACACTCTAATTGATGTTGGTGGTGGTCTTGGTTTCAATCTCAAAATGATCACTTCCAAATATCCAAATATCAATGCTATTAACTTTGACTTGCCTCATGTMATTCAACATGCCCTCACCTATCCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGCATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTAGACACAATGGTTCCGGTTTTTCCGGAGAATAAAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACATGACTTCATTCATTTGGCCACTGCTTCTGGATTTTCTTCCATCAAATTTGTGTGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1167 0.401 MAPSLESNKNVVIDDESNKNLLKEEEEDGMLFAMDLGXLVAXPMAVKTAFELGIFDIXAKGGEHAKXSSEDIASQIGSINPNAPSMVDRLLRLLASHSLLSCSSLPQVTKDENDQEHELIASPQKIVYSLTAAASKYFVSDDDGVNFGHSLSLILDKVFLESWSVSELKGAILEGGVPFVRANGMHAFEYPSVDPRFNDVFNKAMISHTTIVMKRVLESYEGFNNINTLIDVGGGLGFNLKMITSKYPNINAINFDLPHVIQHALTYPGVKHVGGDMFESVPNGDAIFMKCILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDTMVPVFPENKTAAKVAFKADLLMMTQNIGGKERTKHDFIHLATASGFSSIKFVCSVSGYWVMEFYK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0266 388 PIRSF O-mtase 12 388 IPR016461 GO:0008168
Amo12g0266 388 Gene3D Vaccinia Virus protein VP39 139 388 IPR029063 -
Amo12g0266 388 SUPERFAMILY "Winged helix" DNA-binding domain 24 106 IPR036390 -
Amo12g0266 388 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 388 - -
Amo12g0266 388 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
Amo12g0266 388 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 387 IPR029063 -
Amo12g0266 388 Gene3D - 12 138 IPR036388 -
Amo12g0266 388 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 388 IPR016461 GO:0008168
Amo12g0266 388 PANTHER O-METHYLTRANSFERASE 1 388 IPR016461 GO:0008168
Amo12g0266 388 Pfam O-methyltransferase domain 167 370 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0266 Amo-Chr12 4264861 4268666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0266 16 388 Monolignol Biosynthesis Gene Families AT5G54160 47.721 7.20e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0266 K13066 - aip:107624476 721.465