Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0261 ATGGGTCAAGAATTTTCTCACGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAACATGAGGAAATTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGAGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGTATGCAAACCTGTTTTCAACAGTTAGAGAGGAGTGCTGCCAATATTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTYTCGGTTTGGACCAAACGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCGTTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTGGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAATACGGTTGTTTGATGGATTGA 960 0.4188 MGQEFSHEGVNSEHTSYDQYEQEEEKHEEIDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRYNLVEFIQHFNRCVDHIRWKEVQADLASVNGRPSMQTCFQQLERSAANIYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSXGLDQTPNEMWRVFCCDIEMEFNCSCMRMESFGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYGCLMD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0261 319 MobiDBLite consensus disorder prediction 1 35 - -
Amo12g0261 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 134 IPR031052 GO:0006355
Amo12g0261 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 136 299 IPR031052 GO:0006355
Amo12g0261 319 PANTHER OS03G0181600 PROTEIN 79 134 - -
Amo12g0261 319 PANTHER OS03G0181600 PROTEIN 136 299 - -
Amo12g0261 319 Pfam FAR1 DNA-binding domain 89 147 IPR004330 -
Amo12g0261 319 MobiDBLite consensus disorder prediction 1 16 - -
Amo12g0261 319 SMART 26again6 252 279 IPR006564 GO:0008270
Amo12g0261 319 ProSiteProfiles Zinc finger SWIM-type profile. 244 277 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0261 Amo-Chr12 4158665 4160717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g0261 FAR1 2.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0261 - - ahf:112723376 360.147